Ursus arctos (brown bear): 113260315
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Entry
113260315 CDS
T05909
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
uah
Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uah03036
]
113260315 (SHOC1)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113260315 (SHOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
SHOC1_2HhH
Motif
Other DBs
NCBI-GeneID:
113260315
NCBI-ProteinID:
XP_026361800
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MFSTFKYCAIDYLYENIVRKKFCRDALLLRVPSCLYQDAGVTDNKFRRPWMRVSAVSVWG
MTDDISVLDQWKASLFVEEFLEKKAITGMVIQTDYGFEEVVPSSNPNSQTEIEEASLYTH
KDYTEVFTLVSGLEKCPALQIQNRDLSIDEEILFLNNLMTYKSQLPTSHTLLSRLKLFLV
KDPILDFKEQIFTEANFFRECFSFQGDLKDLVKEDFYMDKENFCQEKLEDTVGLNETPSI
LPECEFLIPTNLKQEVDIPSLTELKESLNLMPEIINYADENEKLFKIELTTKHGIDIEDI
KCSSTEILAIQSHCEPEYSEPVELEMPLTHLHRTNQHSSMTSLCTGLQTFPFSPVCKISL
LTAEESVSKNWMVWQLESCRSSLKPFLLTVPRTEEPNSQYSAMDLKKIFSIEEERLVVNP
VSTEWWEKGRLNLKEAETLEHLNTYLCHDDLSSDDTKMEIFLPIKVLQLESWLEHKSCSS
PIVLTNEKSTNDHLLLPQKISSPAEEIPDLCFSDDNSSVKQPTKEEKPKNDLELVYRISQ
NKENEDYLELDCAVPSIESSSSPKIEKPSFKHGKKWENDLDLLSDFIMLRNKYKTCTSKT
EVTGSKENDDEEHCLTLQEESPPVCTNKAIEKINQDKGVDNVIKIQASDSQCQAFCLLEA
AATPILKKLVCLCTLPTANWTFATVIFDQTRFLLKEQEKVISDAIQQGTNNEKEMTFKHA
AVLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKSILGFYLDDIWRQLEIVQFIRGKKPET
NYKIQELQSQILNWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVLHSNKRKD
FLEPERVLNGTSSCVVVHNQYIGSDFPWSNFSFVVEYNFVENSCWTKHCEKLNIPHKVFK
VILPDTVLKRSNLLDSFGGFLLEIQVPYVFFASEGLLNTPEILQLLESKYNITLVERCCS
ESLKLFGGTECYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILYT
KKTLNSEYHLTEKTLHHLALIYAALVTFGLKSEELDIKLIIAPGVEEAALIIRQIADHNL
MTSKRDPHEWLDKSWLDVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQ
ELLPEVPEKVLKHFCSITSLFKISSSSITNSSQSPSPQENGNQTSTFTSQNSACDSSNSV
FQEHNEYYHYSDIGETVHGDTNSTLNYNSSLMELREMPCILPPVTSYNQASHWKDSSCNP
NIVHNPFLINTESRNVAGNSFQNQNDSESDVFYLDLTQMNCENIISPIDTQKRVAPNFIN
YKKKGTHDAKGPINIEVSAPNFSLEGSPSPLPWNFKKNVWEQQNHSFNLEYDAGETTCDK
WYSQKDNLITNQQKCLSDELEGFICESSNAGTKKTFWKELPSVPSLDLFCASDPNVNQKE
FSSLRFHQRAGKCSGQKRHSESSPNSGGMKSLPDFMCSQLPKFKKRRLVYEKVPGRVDGQ
TRLRFF
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcgagtcccttcatgtttatatcaagatgcagga
gttactgataataaatttaggaggccatggatgagagtttcagctgtttcagtgtgggga
atgacagatgatatttcagtgttggatcaatggaaagcaagtctctttgtggaggagttc
ctagagaaaaaagcaattacaggaatggtgattcagactgactatggttttgaggaagtt
gttccaagttcaaacccaaactcccaaactgaaatagaggaagccagtttatatacccat
aaggactacactgaagtctttacacttgtcagcggtttagaaaaatgtccagcacttcaa
atacagaacagagatttgtctattgatgaagaaatactttttttaaataacttgatgacc
tataaaagtcagctaccaacttctcatactttgttgagtaggctaaaactatttttggta
aaagaccccattttagatttcaaagaacagatcttcacagaagctaatttcttcagggaa
tgtttctcttttcaaggagatttgaaagatctagtaaaagaagatttttacatggataaa
gagaacttttgtcaggaaaagctagaagatacggtaggtttaaatgaaactccatcaatt
ttgcctgagtgtgaattcttaatacctacaaacctcaaacaagaagttgatattccatca
ctcaccgaactgaaggaatccttaaacttaatgccagaaataataaattatgcagatgaa
aatgaaaagcttttcaaaatagaacttactaccaagcatggaattgacattgaggatata
aaatgcagctccacagagattttggccattcaaagccattgtgaaccagaatacagtgaa
ccagtagagttagaaatgccattaactcatctacatcgaacaaaccaacattcttccatg
acttcattatgtacaggacttcagacatttccattttctcctgtttgtaaaattagtttg
cttaccgctgaggaatcagttagcaaaaactggatggtgtggcagttagaaagctgcaga
agctcattgaaaccatttttgctcacagtgccaaggactgaagagcccaacagtcaatat
tctgctatggatttgaaaaagatattttctattgaagaagaaaggcttgtagttaatcct
gtaagcacagagtggtgggaaaaaggaagactaaatctgaaagaggcagaaactttggaa
catctgaatacatatttgtgtcatgatgatctatcttctgatgatactaaaatggagata
tttttgccaataaaagtgcttcaattagaatcatggctagaacataaaagttgttcctca
cctattgtacttactaatgagaagtctacaaatgatcatttattacttccacaaaagatt
tcatctccagcagaagaaataccagacctgtgtttttctgatgacaattcatctgttaaa
caaccaacaaaagaagaaaaaccaaagaatgatctagaactagtttatagaataagccaa
aataaagaaaatgaagattacttggaacttgactgtgcagtaccatctattgaatcatct
tcctctccaaaaattgaaaaaccatcttttaaacatggtaaaaaatgggagaatgatttg
gatcttttgagtgactttattatgctgcgaaataaatataagacttgcacctcaaagacc
gaagtcacaggaagtaaagaaaatgatgatgaagaacattgtttgactcttcaggaagaa
agtcctcctgtttgtactaataaagccatagagaaaataaatcaggataagggagtggat
aatgtcattaaaattcaagcgtcagacagccagtgccaagcattctgtctcctagaagca
gcagctactcctatcctaaaaaaacttgtatgcctctgtactctgcctacagctaattgg
acatttgccactgtcatttttgaccaaacaaggttcctcttaaaggaacaagaaaaagta
ataagtgatgctattcagcaaggtacaaataatgaaaaagaaatgacgttcaagcatgct
gctgtcttacatcttctggtaacaattagagatgtccttttaacatgtagcttggacaca
gcattgggatatttgtcaaatgcaaaagatatctacaaaagcattttaggcttctatttg
gatgacatttggagacagctggagattgtacagtttattagggggaaaaagcctgaaacc
aattacaagatacaagaactgcaaagtcagatactaaattggatgcaaagtgagcaacag
attaaggtgctgattataataagaatggactcagatggtgaaaaacatttactcattaaa
atccttaacaaaatggaaggtttaacattgactgtcttacattcaaacaaaaggaaagat
tttctggaacctgaacgtgttttaaatggtacaagttcctgtgtggttgtacataatcaa
tatattggatcagattttccctggagtaacttctcatttgtggtggaatacaattttgta
gaaaactcttgttggactaaacactgcgagaagttgaacattcctcacaaggtcttcaaa
gtgattcttccagacacagttttaaagagaagcaacctgctggatagttttggtggattt
cttttggaaattcaggttccatatgtgttttttgcatctgaaggacttcttaatactcca
gaaatacttcagttgctagaatccaagtataatatcacactagtggagagatgctgcagt
gagtcgctgaaactctttggaggtacagagtgttatgtagtggtgacaattgatgaacac
actgccataattttgcaggacctagaagaattgaattgtgagaaggcatcagacaatatc
attatgagactgatggcattatcattccaatacagctactgttggataatcttatatacc
aaaaaaacattaaactcagagtaccatcttacagaaaaaacacttcatcatctagcattg
atttatgcagctttggtaacatttgggctaaaatcagaagaactggatataaagcttata
attgccccaggagtggaagaggctgcactgataattcggcaaattgctgatcacaattta
atgacctcgaagagagatcctcatgaatggttggataaatcttggcttgacgtttcacca
tctaaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcagctc
atgttaaacaaaggaccttcactgcactggatattattagcaactctgtgtcaacttcag
gagcttttacctgaagttccagaaaaagtgttaaagcatttttgtagcatcacttcctta
ttcaagattagttcttcttccataacaaactcatctcaaagtccatcacctcaggaaaat
gggaatcagactagtacctttacctcccagaactcagcttgtgactcttcaaactctgtc
tttcaagaacataatgagtattaccactattcagacataggagagacagtgcatggagac
acaaacagcactttaaactataactcttcccttatggaactaagagaaatgccatgcatt
ttaccacctgtgacttcttataatcaggccagccactggaaggactccagttgtaaccct
aacatagtgcataaccctttcctgattaatacagaatcaaggaatgtggctggtaactcc
tttcaaaaccaaaatgattcagagtcagatgtcttttatttggatctaacacaaatgaac
tgtgaaaacataatatcaccaattgacactcagaagagagttgcccctaattttataaat
tacaagaaaaaaggaacacatgatgcaaaaggacctataaatatagaagtgtctgcccct
aacttttcactagaaggctccccatctcctcttccctggaactttaagaaaaatgtatgg
gaacagcagaatcactcattcaacttagaatatgatgcaggggagactacatgtgacaaa
tggtactctcagaaagataatttaatcactaatcagcaaaaatgtctatcggatgagtta
gaaggcttcatatgtgaaagttcaaatgctgggactaaaaagaccttctggaaagaatta
ccatctgtccccagtttggatttattttgtgcttccgatcctaatgtaaatcaaaaagaa
ttcagcagtcttcgtttccaccaaagagctggaaaatgttcaggacagaaaaggcactct
gaatcctcacctaactcaggaggcatgaaatcgttaccagatttcatgtgctcacaacta
ccaaaattcaaaaaacgacgtctagtgtatgaaaaagtccctggtagagttgatggacaa
actcgtctgaggtttttttga
DBGET
integrated database retrieval system
