KEGG   Ursus arctos (brown bear): 113264354
Entry
113264354         CDS       T05909                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X6
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
uah  Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:uah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:uah03400]
    113264354 (MDC1)
DNA repair and recombination proteins [BR:uah03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    113264354 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 113264354
NCBI-ProteinID: XP_026367094
LinkDB
Position
Unknown
AA seq 1969 aa
MVAYWIGAKGPGLPLSSPFVMEDTQAVNWEVEEEEETETPNESLGCSLEPVGRLHIFSSA
HGPEKDFPLYLGKNMVGRMPDCSVTLPFSSISKQHAVIEITAWDKAPVLQDCGSLNGTQV
LRPPKVLSPGVSHRLRDQELILFADLPCQYHRLNVPLPFVSRGFLTVEETPRVQGGTQPQ
RLLLAEDSEEEVDSPSERCVMKEPRTSSLAAVVPESDEEGPSPAPDGPGLPFAFNLDSDT
DEEESQHPAAGEASLAARTGSTAETEQPKVLATEIQLEKDQCSVKERNNDTKVEKDARNE
VVPLGATLERNQTAGEDSDTDMDESRPAGLHLERAQASGIIDSDTDVEEEGIPATPAVVP
IKKRQIFHGVSTESPQAPALVHLQESPTGSDTDVEQSELQLAVPPERNQASVVIDSNTDD
EEEVLAALTLARLKESRANTWKRDTDVEEDRAQPVALLEQSQTSAGRDSDTDVEEEGIPM
EKRGTVPKCHTDKAHSEKRQSPLRDSELGVDKDKSSLGVHLERSQASATVDINTQVEEKA
LSGPAVTLVGKHQVPMVWTSQTDAEVEGGQAKLPVMHLEEAHPPPLGDCETDAEEGTSLA
ASVVADTGKCQLPAKRDAGTEWAAAVLERERALEARAQGESLVSQVEQDLLPVSRENLID
LVVDTGTSGEPIQPQREGAQTPTERERDPHGNKTKDFGDNHGDSEDLDLQATQCFVEREN
QSPEAVQSMEDEATQAFLVTLPQEPGPSCCSFQAPGALDEPWEVLATQPFCPRESEASEP
QPIAAHLDAHGSCPSTPRTTPQAQHPEGPIHEEPLGIQGRGMQTVQKDMGTPREAVEGVA
PERGPLNRETKNLPAGEREDMIEEEALTRGIRVLARDNQGQESDQKVKSASIKRNMESLN
IEIEIPNEVQEEGIGKQTLAREIFEREAEKLVLERGGEPSGLGIEVPEVKLERGPQRGET
GKGSQDQEEQASSLTSEPRAGTGDHQGLASAPGASGSQSGGAPMSPRRQQRGHVTCKMPP
ADKASVGDQESADACLPPAVPEASTPHQNPLLSQSQKHPVPQSFLSPSLSSLEPIPRTTQ
HGNQEVPETPLSSEMEPLHPKSKVRLRGSSRKTPSAISSLALEPHSTSPTDQPLSPKLTS
RVTRGRTHRSSVKTPDPVVPTAPELQISTSKDQPVTSESTLQVTRSRTHRFSVKTPELVV
PMVPEVQPSTSKEQPVTAELISPGRTRKSVKIPEPVVSPATRGKAHGSSVKTPKPVIPTA
TELQPSTSKDQSVTPEPISRVTWGRTRRSSVKIPEPTVPTVPELQPSTSKDQSITPEPTS
QVAWGRTRRSSVKTPEPTVSTAPELQPSTSKDQSVITEPTSGATHSRTHRSSVKTPEPII
PTAPEVQPSIPTDQPVIPKPTSQVRTPRSAKTPDPIVPTALDLQPTTPGGQPVTPKRTSR
GRTPRSSSKTPKSVVPTVPELQTSTPTDQPVTPKLTSQATRGRTQRSSIKTPEPVAPTAP
EQPSISTDQPVTPEPTSRATRGRTHRSFVKIPQPTEPTAPDLESLTPTDRLVTPKAQGSQ
GKTLRSSTVSALPVLTNPEFQSPVPTDQPIPPEPIPQATCSRRLRATRKHGSLTAPIVCE
PSSALPEPKSRSSRNQRQGAVRAVESLRTIPKPAFSQLPEAPTQATQIQNVEAAGGSELT
PEPLPKAAQSRKRPLATVDKPPLQKRLQRGEVTQKTVFLKEEEEDPTERPGKEEDVVVPG
PGKRKRDQAKEEPKGIPSHNLRRTKPNQESTAPKVLFTGVVDARGERAVLALGGSLASSV
AEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPDEYVVTDPEQEENFG
FSLRDALSRAQERRLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPRSYKPQRVVI
TCPQDFPRCSIPFRVGLPILSPEFLLTGVLKQEAKPEAFILSTLEMSSS
NT seq 5910 nt   +upstreamnt  +downstreamnt
atggtggcctactggattggagccaagggtcctgggctcccgctgagttcgccattcgtc
atggaggacacccaggctgttaactgggaggttgaagaagaggaggagacagagacaccc
aatgaatccttggggtgtagcttggagcctgtagggcgattgcatatcttcagtagtgcc
catggaccagaaaaagatttccccctatatctcgggaagaatatggtgggccgaatgcct
gattgctctgtgaccctgcccttttcatccatctccaaacaacatgcagtgattgaaatc
acagcttgggacaaggcacctgtcctccaagattgtggcagcctcaatggtactcaagtc
ctaaggcctcctaaggtcctaagcccaggggtgagtcatcggctaagggaccaggagttg
attctctttgctgacttgccctgccagtaccatcgcctgaatgtccctctgccctttgtt
tcccggggctttctaactgtagaagagacacccagggtacagggaggaactcaaccacag
aggctcctgttggctgaggactcggaggaggaagtagattctccttctgaaaggtgtgtg
atgaaagaaccaaggacctcctctttggcagcagtagttccagagagtgatgaagagggg
ccttctcctgccccagacggtcctgggctaccatttgccttcaacctggacagtgacaca
gatgaggaagaaagtcagcatccagcagcaggagaggcctccttggctgccagaacaggc
tccactgcagagacagaacagcctaaagttctggcaactgaaatccagcttgaaaaggat
cagtgttcagtgaaggagaggaacaatgacacaaaagttgagaaggatgcaaggaatgaa
gtggtcccacttggggccactctggagagaaatcaaactgctggggaggacagtgacaca
gatatggatgagagcaggcctgctgggctccatttggaaagggcccaggcttctggcatc
atagacagtgatactgatgtggaagaagaagggatccctgcaaccccagctgtagttcct
ataaagaagaggcaaatctttcatggagttagtacagagagtcctcaggcacctgctttg
gtacatctacaggagagcccaactggtagtgatacggatgtggagcaaagtgagctccaa
ctggcagtccctccagagagaaaccaagcctccgtcgtgattgacagcaatacagatgac
gaggaagaagtcttagcagcgctcactttggcacgtctgaaagagagccgagccaataca
tggaagagagatacagatgtggaagaggacagggcccaacctgtggcccttctggagcaa
agccaaacctctgctgggagagacagtgacacagacgtggaggaggaggggatcccaatg
gaaaagagaggaactgttcccaagtgtcatacagataaggcacattcagaaaagaggcag
tctcctctccgagacagtgaactaggggtggacaaagataagagctcacttggggtccac
ctggagagaagccaggcctctgccacagtggacatcaacacacaagtggaggagaaggcc
ctgtcagggccagctgttacacttgtggggaagcatcaggtgcctatggtatggacaagc
caaacagatgcggaagtagaagggggccaagcaaagctgcctgtgatgcatctagaggaa
gcccaccctcctccacttggggactgtgagacagatgcagaagagggcacatccttagca
gcctcagtggtggcagatacaggaaagtgccagcttccggcaaaaagggatgctgggaca
gaatgggctgcagctgttcttgagcgggagagagctcttgaggcaagggcccagggtgag
tcccttgtgtcacaggtggagcaggatcttctccctgtgtccagggagaaccttatagat
ctggtggtggacacaggcacttcaggggaacccatccagccacagagagagggagcccag
acccccacagaaagggagagagacccacatgggaataagaccaaggactttggggacaac
catggtgattctgaagacctggacctacaggctacccagtgctttgtggagagagagaat
cagagcccagaagcagtccagagcatggaggatgaagccacccaggccttcctggttact
ttaccccaagagcctggcccttcctgttgcagtttccaggccccaggtgccctggatgag
ccgtgggaagtcttggcaacacagccattctgtccgagagagtctgaggcctctgagccc
cagcccattgccgcccaccttgatgcccatggatcttgcccctctacacctaggacaaca
ccacaagcccaacatccagagggcccaattcatgaagagccactggggattcaaggcaga
gggatgcagactgtgcagaaagacatgggtacaccaagagaagcagtagagggggtggcc
cctgagagaggaccattgaacagggaaaccaagaacctgccagcaggagagagagaagat
atgatagaagaagaagctttaaccagagggatacgggtgttagctagagataatcaggga
caagagtctgaccaaaaggtgaaaagtgcaagtattaaaaggaatatggagagtttaaac
atagaaattgagatacccaacgaagtacaagaggaagggataggaaagcagactcttgca
agagaaatatttgagagagaagcagagaaactagtactagagagagggggtgagccaagc
ggattaggcatcgaggtaccagaagtaaagctggagagaggcccacagagaggggaaaca
gggaagggaagccaggaccaggaagagcaggcttccagtttaacatcggagcctagagca
gggacaggggaccatcagggacttgcttcagccccaggagcttctgggagccagtcaggt
ggagccccaatgagccccaggaggcaacagagaggccacgtgacttgcaagatgccacct
gctgacaaggcctctgtgggtgatcaggaatccgcagatgcttgtctgcctcctgcagtg
cctgaagcctcaaccccacaccagaacccccttctctctcagagtcaaaaacatcctgtg
ccccagtccttcctttctccttctctatcttctttagagcccattcccaggaccacacaa
catgggaatcaggaagttccagagactcccttgtcatcagagatggagcctctccaccca
aaatccaaagtcaggctccgagggtcttccaggaagacaccctccgcaatttcttcttta
gcccttgaacctcattctaccagccccacagaccagcccctcagtcccaagctcacatct
cgggtcactcggggcaggacacataggtcctctgtcaagacccctgatccagttgtcccc
acagcccctgagctccagatttccacctccaaagaccagcctgtcacctctgagtccaca
ttgcaggtcactcggagtaggacacataggttctctgtcaagacccctgaactggttgtt
cctatggtccctgaagtccagccttccacctccaaagagcagcctgtcactgctgagctc
atatctccgggcaggacccgtaaatctgtcaagatccctgaaccagttgtctccccagcc
actcggggcaaggcacatgggtcctctgtcaagactcccaaaccagttatccctacagcc
actgagctccagccttctacttccaaagaccagtctgtcacccctgagcccatatctcgg
gtcacttggggcaggactcgtaggtcctctgtcaagattcctgaaccaactgtccccaca
gtccctgaactccagccttccacctccaaggaccagtctatcacccctgagcccacatct
caggtcgcttggggcaggacacgtaggtcctctgtcaagactcctgaaccaactgtctcc
acagcccctgaactccagccttccacctccaaagaccagtctgtcatcactgaacccaca
tctggggccactcacagcaggacacataggtcttctgtcaagactcctgagccaattatc
ccaacagctcctgaagtccagccttctatccccacagaccagcctgtcatccccaaaccc
acatctcaggtcaggacacccaggtctgctaagacccctgatccaattgtccccacagcc
cttgacctccagcctaccacccccggaggccagcctgtcacccccaaacgtacatctcgg
ggcaggacacctaggtcttctagcaagacccccaaatcagttgtccccacggtccctgag
ctccagacttccacccccacagaccagcctgtcacccccaaactcacatctcaggcaact
cggggcaggacacaaaggtcctctatcaagacccctgagccagttgcccccacagcgcct
gaacagccttccatctccacagatcagcctgtcactcctgagcccacatctcgggccact
cggggcaggacacataggtcctttgtcaagatcccccagccaactgaacccacagcccct
gaccttgaatctctcacccccacagatcggctggtcacccccaaggctcagggtagtcag
ggtaagacactaaggtcttctacagtaagtgctctgccagttcttaccaaccctgaattc
cagtctcctgttcccacagaccagcctattccccctgagcccatccctcaagccacttgc
agcaggaggctgagggccactaggaagcatggatccctcacagctcccattgtctgtgag
ccctcctctgcactccctgaacctaaatctcggtcctcaaggaaccaaagacaaggagca
gtgagagcagttgagtccctcaggaccattcccaagcctgccttttcccagcttcctgag
gcccccactcaggctacccagatccaaaatgtagaggcagcaggcggatctgagctcacc
ccagagcccctgcctaaggccgctcagagtcgcaagaggcctttggctactgtggataaa
cccccacttcaaaaacggctccaaagaggagaagtcacccagaagacagtgttcctcaaa
gaagaggaagaagatccaacggagaggccagggaaggaggaggatgtagtggttccagga
ccaggcaagagaaagagagaccaagcaaaggaggagcccaagggaatcccaagccataac
cttcgacggaccaaacctaaccaagagtccacggcccccaaagtactcttcacaggagtg
gtggatgcccgtggagagcgggcagtgctggccctggggggaagtctggctagctccgtg
gcagaggcttcccacctggtaactgatcgagtccgacgcacggtcaagttcctctgtgcc
ctggggcgggggatccccatcctctccttggactggctgcaccagtcccgcaaggctggt
tgcttcttgcccccggatgaatatgtggtgactgatcctgagcaggaggagaactttggc
ttcagccttcgagatgccctgagccgggctcaggagcgaaggttgctggagggctatgaa
atccacgtgaccccaggagtccagccaccaccacctcagatgggagagatcatcagctgc
tgtggaggcaccgtactacccagcatgccccggtcctataagcctcaaagagttgtgatt
acatgcccccaggacttccctcgatgctctattccatttcgggttgggctgcccatcctc
tcacctgagttcctgctgacaggagtgctgaagcaggaagccaagccagaggccttcatc
ctgtccactttggaaatgtcatcctcctga

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