Ursus arctos (brown bear): 113264515
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Entry
113264515 CDS
T05909
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X6
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
uah
Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uah03016
]
113264515 (CDKAL1)
Enzymes [BR:
uah01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
113264515 (CDKAL1)
Transfer RNA biogenesis [BR:
uah03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
113264515 (CDKAL1)
Prokaryotic type
Methylthiotransferases
113264515 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
113264515
NCBI-ProteinID:
XP_026367359
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSWRAPSEVFPVSAERRVVLSLWADFPEDLRLIADSQEKMPSASCDTLLDDIEDIVLQGD
LKPQDRHSARKHVVPKARKRNTQKYLQEENSPPSDSTIPGIQKIWMRTWGCSHNNSDGEY
MAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKIVLAGCVPQA
QPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKN
PLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGA
YGRDIGTSLPALLWKLVEVIPEGAMLRLGMTNPPYISEHLEEMAKILNHPRVYAFLHIPV
QSASDTVLMEMKREYCVADFKRVVDFLKEKVPGITLATDIICGFPGETDQDFQETVKLVE
EYKFPSLFINQFYPRPGTPAAKMAQVPAQVKKQRTKDLSRVFHSYNPYDHKIGERQQVLV
TEESFDSKFYVAHNRFYEQVLVPKNPTFMGKMIEVDIYESGKHFMKGQPVSDAKVYTPSI
NKPLAKGEVSGLTEEFRNRLGNHPSSVPHTSAAARRDPASSRTAPRLQRLHQDCALRVSV
GLALCALLLAFLVKVYN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggcgagctccatctgaagtgtttcccgtatcggcagaacggcgtgtggttctc
tcactttgggctgactttccagaggatttgagactaattgcagatagtcaagagaagatg
ccttctgcgtcctgcgacacactactggatgacatagaagatatcgtgttacagggagac
ttaaagccacaagataggcattctgcacgaaagcatgttgttccaaaggcacgaaagcga
aacacccaaaaatatttgcaagaggaaaacagtccaccaagtgatagcaccattccaggc
atacagaaaatttggatgagaacgtggggttgttctcataataattcggatggagaatac
atggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagacgcagat
ttatggctcctgaatagttgtactgtaaaaaacccagccgaagaccactttagaaactca
attaaaaaagctcaagaggagaataagaagatagtgctagctggatgtgttcctcaagcc
cagcctcgacaggactaccttaaaggactgagtatcataggggttcaacagatagatcga
gtggtagaagttgtggaagaaacaattaaaggtcactctgtgagactgctgggtcagaaa
aaggataatggaaagcgcttgggtggagcgcgattggatttgccaaagatcaggaagaat
cccctgatagaaatcatttccatcaatactgggtgtctcaacgcttgtacctactgcaaa
actaaacacgccagaggaaatttggccagttacccaattgacgaactagtagaaagagcc
aaacagtcttttcaagagggtgtttgtgagatatggttgaccagtgaagacacaggggct
tacggcagagacattggcaccagtctccccgcactgctgtggaaactggttgaagtgatt
cctgagggagcgatgctgaggcttggcatgacaaatccaccctatatttcagagcatctg
gaggaaatggcaaaaatccttaatcatcccagagtctacgcttttctgcacatcccagtc
cagtctgcctccgacactgtactcatggaaatgaaaagggaatactgcgtggctgacttc
aaaagagtagtggattttctgaaagagaaagttcctggaataactcttgctacagatatc
atctgtggttttcctggagaaacagatcaggattttcaagaaacagtgaaacttgtggaa
gagtacaaatttccaagcctctttattaaccagttttacccaagaccaggaactcctgct
gcaaaaatggcacaagttccagcacaagtgaaaaagcaaagaacgaaagatctttctcgg
gtattccattcttacaatccgtacgatcacaagattggcgaaagacaacaagtgttagtg
acagaagaatcttttgattccaagttttatgttgcccacaatcgattctacgagcaggtt
ttagtgccaaagaaccccacattcatggggaaaatgatcgaagtggacatttatgaatca
ggcaaacattttatgaaagggcagccagtatcagatgccaaagtatacacgccgtccatc
aacaaaccattagcaaagggagaagtctcaggtttaacggaggaattcagaaataggctt
gggaatcacccgagctcggtgccccacacttctgctgcggctcggcgggaccccgcgagc
tcccgaacggcgccccgcttgcaaaggctccatcaagactgcgcactgagggtgtctgtg
ggcctggctctgtgtgctctccttctggcttttttggtcaaagtctataattaa
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