Ursus arctos (brown bear): 113265378
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Entry
113265378 CDS
T05909
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113265378 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uah03041
]
113265378 (DHX8)
Enzymes [BR:
uah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113265378 (DHX8)
Spliceosome [BR:
uah03041
]
Complex C
Other components
Step II factors
113265378 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
Sigma54_activ_2
PhoH
TsaE
nSTAND_NTPase5
OB_RRP5_4th
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113265378
NCBI-ProteinID:
XP_026368507
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MAVAVALAGAVTGTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDKTKKKKRSWSR
DRDRERDRDRDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSQSPPKDRKDRDKYG
ERTLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRR
EGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEET
SMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEE
TGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSAL
AKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHA
FGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL
AEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMT
DGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDA
VKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTG
QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA
ETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRL
YTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLY
TLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPK
DKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQM
LGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALF
NRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLY
NRYEEPNAWRISRAFRRR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggccttggcgggagccgtaaccggcacagagctaggccccgcggag
gaactcgccaaactcgagtatctgtctttagtgtcgaaagtttgcaccgagctggacaat
cacctggggatcaacgacaaggatctggctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaggcatctctggtaaaaaatggtgccgaattcacggattcc
cttattagtaacttgctgcggctcatacagaccatgcggcctccagcaaagccttctact
agcaaagatccagttgttaaacccaaaactgggaaagaaaagctgaaggaactcttccca
gtcctttgccaaccggacaacccttctgttcggaccatgctggatgaggatgatgtgaaa
gtcgctgtggatgtcctaaaggaactggaggccttaatgcccagtgcagcgggccaggag
aagcagagagatgctgagcaccgggacaagacaaagaagaagaagcggagctggagccgc
gaccgggaccgagaacgtgaccgagaccgagaccgtgatagagaccacaagaggagacac
cggtcccgctcccggtcacgttccaggacccgggaaaggaataaagggaagtccaggtat
cggtccaggagcagaagtcagagtccccccaaagacaggaaggaccgggacaagtatggg
gaaaggactctggacagatggcgggataagcatgtggaccgcccacccccggaagagcct
gccatcggagacatttacaatggcaaagttaccagcatcatgcagtttggatgctttgtg
cagctggagggattaaggaagcggtgggaaggcctggtgcacatctctgagctccggcga
gaaggccgtgtggccaatgtggctgatgtggtgagcaaaggccagagggtgaaggtcaaa
gtactgtccttcactgggaccaagaccagtctgagcatgaaggatgtggatcaagagact
ggagaagatctaaaccccaaccggcgacgaaatctcgttggggagaccaatgaggagacc
tccatgaggaatccagacagacccactcacctctccctcgtcagcgcccctgaagtagag
gacgattcactggagcgcaagcgccttacccgcatctctgacccggagaagtgggagatc
aaacagatgattgctgccaatgtcctttccaaagaagagtttccggacttcgacgaagag
actggcattctccctaaagtggacgatgaagaagatgaagatcttgagatcgaactggtt
gaggaagagcctccgttcctgagaggccacaccaagcaaagcatggacatgagccctatt
aaaatcgtcaagaacccggatggttccctctcccaagcagcaatgatgcagagtgcctta
gccaaagaaaggcgggaactcaagcaggcccagcgggaagcggagatggattctattccc
atggggctcaacaaacactgggttgatcctctgcctgatgcggaaggcaggcagattgct
gccaatatgaggggtattgggatgatgcccaatgacatccctgagtggaagaagcatgcc
tttgggggcaacaaagcttcttacgggaaaaagacgcagatgtcaatcattgagcagaga
gagagcctgcccatctacaagctgaaggagcagctggtccaggctgtccatgacaaccaa
atcctgattgttattggagagacaggatctgggaagaccacgcagatcacccagtacctg
gcggaggcaggctacacgtcccggggcaagataggatgtacccagcccagaagagtagca
gccatgtccgtggccaaaagagtgtcggaggagtttggttgttgcttgggccaagaggtg
ggctacaccattcgctttgaggactgcaccagcccggagacagtgatcaagtacatgaca
gacgggatgttgctccgagagtgcctgattgaccccgacctcacacagtacgcgatcatc
atgttggacgaggcgcacgagagaaccattcacaccgacgtgctctttggattgctgaag
aagacggttcagaagcggcaggacatgaagctgatcgtcacctccgccacgctggacgca
gtgaagttttcgcagtacttctacgaagcgcccatcttcaccatcccaggtcggacatac
ccggtggaaatactgtacacgaaggaacccgagacagattatctggacgccagcttgatc
accgtcatgcagatccatttaacagaaccgccaggtgatatcctggtcttcctgactggt
caggaggagatcgataccgcttgcgagatcctctatgaaagaatgaaatccctgggaccg
gatgttccagagctgatcatcctgccggtatactctgctcttcccagtgagatgcagacc
cgaatcttcgacccggctccgcctggcagcaggaaggtcgtgattgccaccaacatcgca
gagacctcgctgactattgatggcatctactatgtggtggaccctgggtttgtgaagcaa
aaagtttacaattccaagactggcatcgatcagctcgtggtcactccgatttctcaggct
caggcaaaacaacgagctggcagagccggcagaacaggcccaggaaagtgttacaggctg
tacaccgaacgtgcctaccgagatgaaatgctgaccaccaacgtgccggaaatccagagg
accaacctagcgagcacagtgctctcgctcaaggccatgggcatcaatgacctgctgtcc
tttgacttcatggacgcccctccaatggaaaccttgatcacggccatggagcagctgtac
acgctgggggccttggacgacgagggcctgctcactcgcctgggccgcaggatggcagaa
ttccctctggagcccatgctgtgcaaaatgctgatcatgtccgtgcatctgggctgcagc
gaggagatgctaaccatcgtgtccatgctgtcggtgcagaacgtcttctacaggcccaag
gataaacaagccctcgcagaccagaagaaagccaagttccaccagaccgaaggggaccac
ctcaccctgctggccgtgtacaactcctggaagaacaacaagttctccaacccgtggtgc
tacgagaactttatccaggctcgctctctgcgccgggcccaggatattcgcaagcagatg
ttgggcataatggacaggcacaagctggatgtggtctcctgtggcaagtccacggtgcga
gtgcagaaggccatctgcagtggattcttccggaacgctgccaagaaagacccgcaggag
ggctaccggacgctgatcgaccagcaggtggtctacatccacccttccagcgctctcttc
aacagacagcccgaatgggtggtgtaccacgagctggtgctgaccacgaaggagtacatg
cgtgaggtcaccactatcgaccccaggtggcttgtagagttcgccccggccttcttcaag
gtctccgacccgaccaagctgagcaagcagaagaagcagcagcgtcttgaacccttgtac
aaccgctacgaggagcccaacgcgtggagaatatcccgggccttccggcggcgctga
DBGET
integrated database retrieval system
