Ursus arctos (brown bear): 113265882
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Entry
113265882 CDS
T05909
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X2
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04622
RIG-I-like receptor signaling pathway
uah05161
Hepatitis B
uah05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113265882 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
113265882 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
113265882 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113265882 (DDX3X)
03041 Spliceosome [BR:
uah03041
]
113265882 (DDX3X)
03036 Chromosome and associated proteins [BR:
uah03036
]
113265882 (DDX3X)
Enzymes [BR:
uah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113265882 (DDX3X)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113265882 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
113265882 (DDX3X)
Spliceosome [BR:
uah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113265882 (DDX3X)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113265882 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113265882
NCBI-ProteinID:
XP_026369105
LinkDB
All DBs
Position
X
Genome browser
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggactagac
ctgaactcttcagataatcagagtggaggaagtacggcaagcaaggggcgctatattcct
cctcacttaaggaacagagaagctactaaaggattctacgataaagacagttcagggtgg
agttctagtaaagataaggatgcatacagcagttttggatctcgtagtgattcaagaggg
aagtctagtttctttagtgatcgtggaagtggatcaaggggaaggtttgatgatcgtgga
cggagtgactacgatggcattggcagccgtggtgacagaagtggttttggcaaattcgaa
cgtggtggaaatagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttctctggaggaaacactggaattaacttt
gagaaatatgacgacattccagttgaggcaacaggcaacaactgtcctccgcatattgaa
agtttcagtgacgttgagatgggagaaattattatgggcaatattgagcttactcgttac
actcgcccaactccagtgcaaaagcatgctattcctattatcaaagagaaaagagactta
atggcttgtgctcaaacagggtctggaaaaactgcagcgtttctcttacccatcttgagt
cagatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
gggcgtcgcaagcaatacccaatctccttggtattagcaccaactagagaattggcagta
cagatctatgaggaagccaggaaattttcataccgatctagagttcgaccttgcgtggtt
tatggtggtgctgatatcggtcaacagatacgagacttagagcgtggatgccacttgtta
gtagctactccaggacgtctagtggatatgatggagagaggaaagattggattagacttt
tgcaaatacttggtgttagatgaagccgatcggatgttggatatgggttttgaacctcag
atacgtagaatagttgaacaagatactatgccaccaaaaggtgtccgccacactatgatg
tttagtgctacttttcctaaggaaatacagatgctggctcgtgatttcttggatgagtat
atctttttagctgtaggaagagttggctctacctctgagaatattacacagaaagtagtt
tgggtggaagagtccgacaaacggtcgtttttgcttgatcttctaaatgcaacaggcaag
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaagatttc
ttgtaccatgaagggtatgcttgtaccagtatccatggagaccgatctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaaacatgttatcaattttgacttgccaagt
gatatcgaagaatatgtacatcgcattggccgtacaggacgtgtagggaaccttggcctt
gccacctcattctttaatgagagaaatataaacattaccaaggatttgttggatcttctt
gttgaagctaaacaagaagtgccatcttggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgatctaagagtagtagattcagtggaggatttggtgcccga
gactatcgacaaagcagcggtgccagcagttccagcttcagcagcagccgcgcaagcagc
agccgcagtggtggaggcggccacggcagcagcagggggtttggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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