Ursus arctos (brown bear): 113265929
Help
Entry
113265929 CDS
T05909
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X3
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04613
Neutrophil extracellular trap formation
uah05014
Amyotrophic lateral sclerosis
uah05034
Alcoholism
uah05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
113265929 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
113265929 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
113265929 (HDAC6)
09165 Substance dependence
05034 Alcoholism
113265929 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
uah01009
]
113265929 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113265929 (HDAC6)
04131 Membrane trafficking [BR:
uah04131
]
113265929 (HDAC6)
03036 Chromosome and associated proteins [BR:
uah03036
]
113265929 (HDAC6)
Enzymes [BR:
uah01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113265929 (HDAC6)
Protein phosphatases and associated proteins [BR:
uah01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113265929 (HDAC6)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113265929 (HDAC6)
Membrane trafficking [BR:
uah04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113265929 (HDAC6)
Chromosome and associated proteins [BR:
uah03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113265929 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
113265929
NCBI-ProteinID:
XP_026369160
LinkDB
All DBs
Position
X
Genome browser
AA seq
1159 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLS
QAAEQDLIVGLQGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPECPERLHAIKEQLI
QEGLVDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVLGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHAIQRVLIVDWDVHHGQGTQFAFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGRG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGLAQLTHLLMGLAGGKLILSLEGGYNFRSLAEGVSASLHTLLGDPCPILESPGAPCRSA
QASLSCALEALEPFWEVLVRSAETLEEDFLEEENVEKEEEGPWQPPALPILTWPVLQART
GLVYDQRMMGHYNLWDNYHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHS
AEYVGRLRATAKMKTRELHREGSNFDSIYICPGTFACAQLATGATCRLVEAVLAGEVLNG
AAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFE
EDPSVLYISLHRYDHGTFFPMGDEGASSQMGRAAGTGFTVNVAWNGPRVGDADYLAAWHR
LVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGG
YNLTSISESMAACTRSLLGDPPPLLTLARPPLSGALASITETIQVHRRYWRSLRVMKVED
KEGPSSSKSITRKVTPPAHRGSAVRMTAPDRNILDVDTGKATSASSVEVSTPDQAKSETA
VVALNQDQASDAPTREAMLDKTPSEAATEGATLDQTIVGMATVGATPGQTTSEEAVGGAE
VIQTPPALRTDSQTPPASSVQGATAQISPSKLTESLGTLDLNSEAQAPESQSPEEERLLG
EAAEGQHRDHSMLIQSFGDHAVGDQVAFYAVTPLPWCPHLVAVGPIPESGLDVTQPCQDC
GTLRENWVCLSCYQVYCGRYVSAHMLQHHGVSGHPLVLSYVDLSTWCYDCEAYVHHQALL
DVKSLAHQNKFGEDMPHSH
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgcctta
ctccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc
caagcagcagagcaagacctcatcgtgggcctgcaaggactggatctgaaccttgaggcc
aagacactgtctgggactggtttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaatgccctgagcggctccatgccatcaaggaacagctgatc
caggagggccttgtggaccgctgcgtgtccttccaggctcgctttgctgaaaaggaggag
ctgatgttggttcacagcctggaatacattgacctgatggagacgacccagtacatgaat
gagggagagctccgcatcctagcagacacctatgactcagtttacctgcatccgaactca
tatacctgtgcctgcctggcctcgggctctgtcctcaggctggtggatgcggtcctgggg
aatgagatccggaatggcatggccatcatcaggcctccaggacaccacgcccagcacagt
cttatggatggatattgcatgttcaaccacgtggctgtggccgcccgctatgctcaaaag
aagcatgccattcagagggttcttatcgtggattgggatgtgcaccatggtcaaggaaca
cagtttgcctttgaccaggaccccagtgtcctctatttctccatccaccgctacgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccataggttttggccgaggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgcgatgccgactacatt
gccgctttcctgcacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgacgccctccaaggggaccccaagggtgagatggccgccactccg
gcaggactcgctcagctaacgcacctgctcatgggtctggcaggcggcaagctgatcctg
tctctggagggtggctacaacttccgctccctggctgagggcgtcagtgcctcactccac
acccttctgggagacccttgccccatactggagtctcctggtgccccgtgccggagtgcc
caggcgtcactgtcctgcgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagctgagaccctggaggaggacttcttggaggaggagaatgtggagaaggaagaagaa
ggaccgtggcagcccccggcgctcccaatcctgacgtggcccgtgctacaggctcgcaca
gggctggtctatgaccagcggatgatgggtcactacaacttgtgggacaactaccaccca
gagatgcctcagcgagtctttcggatcatgcgccgtttggaagaactgggccttgcaggg
cgctgcctcaccttgcccacacgtcccgccacggacgccgaactgctcacctgccacagt
gctgagtacgtgggtcgtctgcgggccacagcgaagatgaaaacgcgcgagctgcaccgc
gagggctccaactttgactccatctacatctgccccggcacctttgcctgtgcccagctg
gccactggcgccacctgccgcctggtggaggccgtgctggccggagaggttttgaatggc
gccgctgtggtgcgtcccccaggacaccatgcggagcgggatgccgcgtgcgggttttgc
tttttcaactctgtggctgtggctgcacgccatgcccaagccatcagtgggcatgcgctg
cggatcctcatagtggactgggacgtccatcacggtaatggaactcagcacatatttgag
gaagaccccagcgtgctgtacatctccctgcaccggtatgatcacggcaccttctttccc
atgggggatgagggcgccagcagccagatgggccgggccgcaggcaccggcttcactgtc
aatgtggcctggaacgggccccgcgtgggtgacgctgactacctggctgcctggcaccgt
ctggtgctccccattgcctacgagtttaacccagaactggtgctggtctcggctggcttt
gacgccgcacggggggacccgctggggggctgccaggtgtcacccgagggctatgcccac
ctcacccacctgctgatgggccttgccaatggccgcatcatcctaatcctagagggtggc
tacaacctgacctccatctcggagtccatggctgcctgcacccgttccctccttggggac
ccaccaccactgctaaccctggcgcggcccccgctgtcaggggccctggcctccatcacc
gagaccatccaagtccatcgcagatactggcgcagcttgcgggtcatgaaggtcgaagac
aaggagggaccttccagttctaagtcaatcaccaggaaggtgaccccgccagcccaccgt
gggtcagctgtgcggatgaccgcaccagacaggaacattctagatgtggacacagggaag
gctacctcagcatcatccgtggaagtgtccaccccagaccaagctaagtcagagactgca
gtggtggcactcaatcaggaccaagcctcagacgctcccaccagggaagccatgctggac
aagaccccctcagaggcagccacagaaggagccacgctggaccagaccatcgtggggatg
gccacagttggagccacgccaggccagaccacctcagaggaagctgtcgggggagctgag
gtgatccaaacccctccagccttacgtactgacagccagactcccccagcctcatctgtg
caaggagccacagcccagatatcccccagtaagctgactgagagtctcgggaccttggac
ctgaacagcgaggctcaggcaccagaatctcagagcccagaagaggagagactgctagga
gaggcagctgaaggtcagcacagggatcattccatgctgattcagagctttggggaccat
gccgtcggtgaccaggtcgcgttttatgcggtgacaccactgccctggtgtccccatttg
gtggcagtaggtcccatacctgaatcgggcctggacgtgacccaaccttgtcaggactgt
ggaacactccgggagaactgggtgtgtctgtcctgctatcaggtctactgcggccgttac
gtcagtgcgcatatgctgcagcaccacggcgtctcaggacacccgctggtcctcagctac
gtcgacctgtctacctggtgttacgactgtgaggcctatgtccaccaccaggctctcctg
gatgtgaagagcctcgctcaccagaacaagtttggggaggacatgccccactcgcactaa
DBGET
integrated database retrieval system
