Ursus arctos (brown bear): 113266988
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Entry
113266988 CDS
T05909
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
uah
Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uah03009
]
113266988 (DDX54)
Enzymes [BR:
uah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113266988 (DDX54)
Ribosome biogenesis [BR:
uah03009
]
Eukaryotic type
Pre-60S particles
Helicases
113266988 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
113266988
NCBI-ProteinID:
XP_026370701
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MAAGTRAAAGPRSRAAMAQWRKKKGLRKRRGAASQARSSDSEDGEFEIQAEDDTRAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALVLSPTRELAL
QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLRLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDAKLNEQLKTAFFVVREDTKAAVLLHLLRTVVRPQDQTVVFVATKHHAEYLSELLIT
QGVSCTHIYSALDQTARKINLAKFTHGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTPAPRHEGFSGAGGTDGVL
GRVPQSVVDDEEGSLRSTLAAALELRGLGRVADNAQQQYVRSRPAPSPESIKRAKELDLA
GLGLHPLFSSRFEEKELQRLKLVDSIKSYRSRTTIFEINASSRDLSSQVMRAKRQKDRKA
IASFQQGRQGRQGRQEDTAGPAPGCPAPLEQKPEEEEEEEAAGESVEDVFTEVMGRKRQQ
PGPNRGAKRRREEARRRDQEFYIPYRPKDFDSERGLSIGGDGGAFEQQVAGAVLDLMGDE
AQNLTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDD
RDSEDEGTSHQRGPERRGGKRGRGQGASQPRTPGAPAGRVRSELKTKQQILKQRRRAQKL
RFLQRGGLKQLSARNRRRAQELQRAAFGRGAPAKKGKMRKRM
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgcgcggcggccggacctcggtcccgcgctgccatggcccagtgg
aggaaaaagaaggggctgcggaagcgccgaggcgcggcctcccaggcccgcagcagcgac
tcggaggacggcgagtttgagatccaggcggaagatgacacccgggcccagaagctggga
cctggcagacccctgcccaccttccctacctcggaatgcacctcagacgtggagccggac
acacgggagatggtacgcgcccagaacaagaagaagaagaagtccggaggcttccagtcc
atgggcttgagttacccggtgttcaagggcatcatgaagaagggctacaaggtgccaaca
cccatccagaggaagaccatcccagtgatcctggatggcaaggacgtggtggccatggcc
cggaccggcagcggcaagacggcctgcttccttatccccatgttcgagcggctcaagacc
cgcagcgcccagaccggggcccgcgccctcgtcctctcacccacccgcgagctggccttg
cagaccatgaagttcaccaaggagctcggcaagttcacaggcctcaggaccgccctgatc
ctgggcggggacaagatggaagaccagtttgccgccctccatgaaaatcccgacataatc
attgctacccctgggcgcttggtgcacgtggctgtggagatgaacctgaggctgcagagt
gtggagtacgtggtgttcgacgaggcagacaggctctttgagatggggtttgctgagcag
ctgcaggaaatcatcggccgcctccccgggggccaccagaccgtcctgttctctgccacg
ctgcccaaactgctggtggagttcgcgcgggcgggcctcacggagcccgtgctcatccgg
ctcgatgtggatgctaaactcaacgagcagctcaagacagccttcttcgtcgtgcgcgag
gacaccaaggctgccgtgctgctccacctgctgcgcaccgtggtgcggccccaggaccag
acggtggtgtttgtggccacgaagcaccacgccgagtacctcagcgagctgctgataacg
cagggggtgagctgcacccacatctacagtgccctggatcagacggcccgtaagatcaac
ctcgccaagttcacccacggcaagtgttccaccctcatcgtgacggacctagcagcccgc
ggcctggacatcccgctgctggacaacgtcatcaactacagctttcctgccaagggcaag
ctcttcctgcaccgcgtgggccgtgtggcccgggccggccgaagcggcacagcctactcc
ttggtggccccagacgaggttccctatctgctggacctgcacctgttcctcggccgcgcc
ctcacccctgccccccgccatgaggggttctcaggcgcgggcggcacggatggcgtgctg
ggccgggtgccgcagagcgtggtggatgacgaggagggcagcctgcggagcaccctggcg
gcggcgctggagctgcggggcctgggccgggtggccgacaacgcccagcagcagtacgtg
cgctcccggcccgcaccctcgcccgagtccatcaagcgggccaaggagctggacctcgcg
gggctgggcctacaccccctcttcagctcgcgcttcgaggagaaggagctgcagcggctg
aagctggtggacagcatcaagagctaccgctcacggacgaccatctttgagatcaacgcc
tccagccgggacctgagcagccaggtgatgcgcgccaagcggcaaaaggaccgcaaggcc
atcgccagcttccagcagggacggcaggggcggcaggggcggcaggaggacacagctggc
cctgcccccggctgcccggcacccctggaacagaagcccgaggaggaggaggaggaggag
gcagcgggagagagtgtggaggatgtcttcacagaggtcatgggccggaaacggcagcag
ccgggacccaaccggggagccaagaggcggagggaggaagcccggcgtcgggaccaggag
ttctacatcccctaccggcccaaggacttcgacagtgagcgtggcctgagcatcggtggg
gatgggggggcattcgagcagcaggtggctggcgctgtcctggacctgatgggggacgag
gcccagaacctgaccaggggccggcagcagctcaagtgggaccggaagaagaaacggttt
gtgggacaatcaggacaggaagacaagaaaaagatcaagaccgagagtggccgctacatc
agcagctcctacaaacgggacctctaccagaagtggaaacagaaacagaaaatcgatgat
cgtgactcagaagatgaaggaacatcccaccagcgaggcccagagcgaagaggtgggaag
cggggcagaggccaaggtgcatcccagccccgcacccctggcgcccctgcaggccgcgtg
cgctcggagctcaagaccaagcagcagattctgaagcagcggcgccgggcgcagaagctt
cgcttcctacagcgtgggggcctgaaacagctctcggcccgcaaccgccgccgggcgcag
gagctgcagcgggccgccttcggccgcggcgcccccgccaagaagggcaagatgaggaag
aggatgtga
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integrated database retrieval system
