Ursus arctos (brown bear): 113269123
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Entry
113269123 CDS
T05909
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113269123 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
uah03041
]
113269123 (PRPF8)
Spliceosome [BR:
uah03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113269123 (PRPF8)
Complex C
U5 SnRNP specific factors
113269123 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
113269123
NCBI-ProteinID:
XP_026373625
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcccca
ttgccagattacatgtcggaggagaaactgcaagagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcagaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcccccagaacatgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtctacttgggtgccctcaagtacatgccccacgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
catatcactggagccatttcttttgttaatgagattccctgggtcattgaacctgtttac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcggttccccccttttgatgatgaggagccacctttggactatgctgat
aacatcctagatgttgaaccactggaggctattcagctagagctggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggctccacttaccagcgctggcaattcacactgcccatgatgtctacactctaccgc
ctagccaatcagctcctgacagacttggtagatgacaactacttctatctgtttgatctg
aaggccttctttacctccaaggcgctcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaatctccaggatgaagactggaatgaattcaacgatattaac
aaaatcatcatccggcagcctatccgcactgaatacaagattgcttttccttatctatac
aacaacctcccacaccatgtccacctcacctggtaccatactcctaacgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cacaggcactccgtcaagagccaggaaccgttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcccttcctgaaggacacacccctctacacagacaatacagccaat
ggcattgccctgctctgggccccacggcccttcaacctacgctctggtcgcacccgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaaattgctgaagtactatgtgctgaatgccctgaag
caccgaccccctaaagcccaaaagaagaggtacctgttccgctccttcaaagccaccaaa
ttctttcagtccacgaagctggactgggtggaggtggggctgcaggtttgccgccagggc
tataacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcatctggattac
aacttcaatcttaaacctgtcaagaccctcaccaccaaggaaagaaagaaatctcgtttc
gggaatgccttccatctgtgtagggaagttttgcgtttaactaagctggtggtggacagt
catgtgcagtatcgattgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgctcatgtggggcaactgacaggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaatacgggccct
gtagggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcggtggctgggcaacctcctggcccgacagttt
gaaggccgacactccaagggggtggcaaagactgttacaaagcagcgagtggagtcgcat
tttgaccttgagcttcgagcagctgtgatgcatgacattctggacatgatgcctgaggga
atcaaacagaacaaggcccggacgatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtacctgggctgccaacacccatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggaccaacactgcccactacaatcgagaacgg
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctttatctgaaggcggaacaggagagacagcacaactacctgaaggatgggccatat
atcacagcagaggaagcggtggcagtgtataccaccactgtgcattggttggagagccgg
aggttctcacccatcccatttcccccactctcctacaagcatgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctaggtctgatagagcaagcctatgacaacccccatgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgccagtatatgatgtggagccgctggagaagatcactgatgcc
tacttggaccagtacctttggtatgaagctgacaagcgccgtcttttcccaccgtggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaggacgtgtgggagacgagtgagggtgagtgcaatgttatgctggaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctgctgcgactcatc
gtggaccacaacatagctgactacatgacagctaagaacaacgtcgtcatcaactataag
gacatgaaccatacaaattcttatgggatcattagaggcctgcagtttgcttcattcatc
gtgcagtactatggcttggtgatggatttgctggtgttgggactgcaccgggccagtgag
atggctgggccccctcagatgccaaatgactttcttagtttccaggacatagccaccgag
gctgcccaccccatccgtctgttctgcagatacatcgatcgcatccacattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcatcctgacccc
aacaatgaaaatatcgttggctataataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgc
ctgccacggtcagtgactacagttcagtgggagaacagctttgtatctgtgtacagtaag
gacaaccccaacttgctgttcaacatgtgtggctttgagtgccgcatcctacctaaatgc
cgcaccagctatgaggagttcactcacaaggatggggtctggaacctacagaatgaggtt
actaaggagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctctaccaccttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacatactttcgggaggctgtggtgaac
acccaggagcttctggacttgctagtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaactccaagatgcccagtcggttcccacctgttgtgttctatacccctaag
gagttgggtggacttggcatgctttcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacacttccgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gattctcagcgggtctgggctgagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctggaagattcatgggatcgtggcattcctcgaatcaat
accctcttccagaaggaccggcacacattggcttatgataagggctggcgtgttcgaact
gactttaagcaataccaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcattctggaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcccaatcgtaggttcaccctctggtggtcccca
accatcaaccgagccaacgtgtatgtaggctttcaggtgcagctggacctaacaggtatc
ttcatgcatggcaagatccccacactgaagatctctcttatccagatattccgagctcac
ttatggcagaagatccacgagagcattgtgatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagacaattcatcctcgaaagtcctat
aagatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctagcagactccaaggatgtgatggatagtaccaccactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccacgacattgaacgctatgcc
cgggccaagttcctggactataccacagacaacatgagtatctacccttcgcccactggt
gtgcttattgccattgatctggcctataatctgcacagtgcctatggaaactggttccct
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgctttg
tatgtgttacgtgaacggatccgcaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaattatggggagctcttctccaaccagattatctggtttgtg
gatgacacaaatgtctacagagtgactatccacaagacctttgaagggaacttgaccacc
aaacccatcaacggggccatctttatcttcaatccacgcacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaagtggctgccctcatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccactggaggtgcacttgctggactttccc
aatattgtgatcaaaggatcagagctccaactacctttccaggcttgtctcaaggtggaa
aagtttggggacctcatccttaaagccacggaaccccagatggttctctttaatctctat
gatgactggctcaagactatctcatcctacacggctttctcccgcctcatcctgattctg
cgtgccctgcatgtgaataatgaccgggcgaaggtgatcctaaagccagacaagacgacg
attacagagccgcaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaagacctgatcttggctgactacggcaagaaaaacaatgtgaatgtggca
tcactgacacagtcagaaattcgagacatcattttgggtatggagatctcagcaccatca
cagcagcggcagcagatagcggagattgagaaacagaccaaggagcagtcacagctgaca
gcaacacagactcgtactgtcaacaagcatggtgatgagatcattacttctaccaccagc
aactatgagacccagactttctcctctaagactgaatggagggttagggccatctctgct
gccaaccttcacctaaggaccaatcatatctatgtttcatctgatgacatcaaggagacc
ggttatacctatatccttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcaggatacctatatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccaaaccgtgcacctccct
ggccagcttccccagcatgagtacctcaaggaaatggaacccttaggatggatccacact
cagcccaatgaatccccccagctgtcaccccaggatgtcaccacccatgctaagatcatg
gctgacaacccgtcttgggatggtgagaagaccattatcatcacctgcagcttcacacca
ggttcttgcacactgacagcctataagctgacccccagtggctatgaatggggtcgccaa
aatacagacaagggcaacaatcccaagggctatctgccctcacattatgaaagggtccag
atgctgctgtcagaccgcttccttggcttttttatggttcctgcccagtcctcatggaac
tacaactttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtgcacagaccttcccacttcctcaacttcgctctcctg
caagagggcgaggtctactctgcggaccgagaggacctctatgcgtag
DBGET
integrated database retrieval system
