Ursus arctos (brown bear): 113269703
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Entry
113269703 CDS
T05909
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113269703 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uah03021
]
113269703 (CPSF3)
03019 Messenger RNA biogenesis [BR:
uah03019
]
113269703 (CPSF3)
Transcription machinery [BR:
uah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113269703 (CPSF3)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113269703 (CPSF3)
U7-dependent histone pre-mRNA processing factors
113269703 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
113269703
NCBI-ProteinID:
XP_026374411
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSVLSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccgaccccttggagccggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctgttaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagaccagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagtcagtaatatatcagcagacgac
atgctgtatacagagacggacctggaagagagcatggacaaaattgaaaccatcaacttc
catgaagttaaagaagttgcaggaatcaagttttggtgttaccacgcaggccacgttcta
ggagctgccatgttcatgattgagatcgcgggcgtgaagctcttgtacacaggtgatttc
tcaagacaagaagacagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttattattgaatctacttacgggacccatatccatgagaagcgtgaagagcgagaagca
agattctgtaacactgttcatgacattgtgaacagagggggcagaggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgattttagatgagtactggcagaatcac
ccagaactccatgatattcccatatactacgcgtcatctttggccaagaagtgcatggca
gtgtaccagacgtatgtaaacgccatgaatgacaaaatccgcaagcagatcaacatcaat
aatccctttgttttcaagcacattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagcgtcgtcatggcctccccaggcatgatgcagagtggcttatccagagagctc
tttgaaagctggtgcacggataagaggaacggggtcattatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtctgagccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccacggagaa
cagaacgaaatggccagattgaaagcagccctgattcgagaatatgaggacaacgatgaa
gttcacatagaggttcataatcctcggaatacagaagccgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcgggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccctatact
ggtccttttaatttgctctattaccagcttcagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtcatacaggagcca
ggaatggtggtattagaatggctggcgaacccttccaatgatatgtacgcagatacagta
acaaccgtgatactggaagtccagtccaacccgaaaataaggaaaggtgcggtgcagaag
gtttctaaaaaattagaaatgcacgtttacagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgtcagtgtaaaagatggctctgttctcagtgtcacagtggat
gggaaaactgctaatataaacttggagacacggacggtggagtgcgaagagggaagcgag
gatgacgaatccctgcgggaaatggtggagctggccgcgcagagactgtacgaggccctc
acccccgttcactga
DBGET
integrated database retrieval system
