Ursus arctos (brown bear): 113270774
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Entry
113270774 CDS
T05909
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X5
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113270774 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uah03019
]
113270774 (PARN)
Enzymes [BR:
uah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113270774 (PARN)
Messenger RNA biogenesis [BR:
uah03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113270774 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
RRM_1
T6PP_C
NCBP3
Motif
Other DBs
NCBI-GeneID:
113270774
NCBI-ProteinID:
XP_026376078
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDHTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGTLSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLELEPCTGFQRKLIYQTLSWKYPKGIHVDTLETEKKERYIV
ISKVDEEERKRREQQKLAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTATEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYADYVGKKHEEKQSKRKWTEDTWQEVERKRLN
TQCISYALQNHYYHTNSLTATSTAGKRNLSPSPEEADLEARISGEISDTEFEQTESCAEP
LSEGRKKSKKLKRMKKDLSPAGVIPDSPAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagaa
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
actgcattgacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgaccacacagat
tcaaagtacataacaaagtcatttaacttctatgtgttcccaaaacccttcaatagatcc
tcaccagatgtcaagtttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagttttccgcaatggaatcccatatttaaatcaggaggaagagaga
cagttaagagagcagtatgatgaaaaacgtctgcagtccaatggtgcaggaactctgtct
tatgtgtctccaaacacttcgaaatgtcctgtgacaattcctgaggaccagaagaaattt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaacaagaacttg
gaattagagccatgtactgggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcacgttgacactttagaaactgaaaagaaagagcgctacatcgtc
atcagcaaagtagatgaagaagagcgtaagaggagggagcagcagaaactcgctaaggaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgccaattcg
ggaaaacttgttattggacacaatatgctcttggatgtcatgcacacagttcatcagttc
tactgccctctgcctgcggaccttaatgagtttaaggagatgacaacgtgtgtttttccc
agactcttggatacaaaattgatggccagcacacagccttttaaggatatcatcaacaac
acatcccttgcagaattggaaaagcggttgaaagagacgcctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttacgacacagctactgaacagctccacgaggcgggc
tatgatgcttatatcacagggctgtgcttcatctccatggcgaactacctaggttctttt
cttagccctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagttatttcttatgagagtcatggatataccctatctaaacttggaaggaccagacttg
cagccgaaacgcgatcatgttctccatgtgaccttccccaaagaatggaaaaccagcgac
ctttaccagctttttagtgcctttggtaacattcagatatcctggattgatgacacatca
gcgtttgtttctctcagccagcccgaacaagtacagattgctgtcaataccagcaaatat
gcagaaagctatcggatccagacctatgccgactacgtggggaaaaaacacgaggagaag
cagagcaagagaaagtggacagaagacacttggcaggaggtcgagagaaagcggttgaac
actcagtgcatatcctatgctctgcagaaccactactaccacaccaatagtcttacagcg
accagcacggcaggaaagagaaatctgagtccgagcccagaagaagctgacttggaggcc
agaatatcgggggagatttctgacaccgagttcgagcagacagagtcctgtgcagagccc
ctctccgagggaagaaaaaagtccaagaaattaaaaagaatgaagaaggacctttcacca
gcaggagttatccccgacagccctgccaagctcttcgaagtccctgacacgtggtaa
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