Ursus arctos (brown bear): 113270802
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Entry
113270802 CDS
T05909
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah04612
Antigen processing and presentation
uah05145
Toxoplasmosis
uah05152
Tuberculosis
uah05164
Influenza A
uah05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
113270802 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
113270802 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
113270802 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
113270802 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
113270802 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
uah01001
]
113270802 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
uah04054
]
113270802 (CIITA)
Enzymes [BR:
uah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
113270802 (CIITA)
Protein kinases [BR:
uah01001
]
Serine/threonine kinases: Other
TAF1 family
113270802 (CIITA)
Pattern recognition receptors [BR:
uah04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
113270802 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
113270802
NCBI-ProteinID:
XP_026376110
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MNHFQTILPRVRMLLSSYRPGQVQALLDHMLEKELLSQEYHGALLREPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQAPVAERDPNSKDHSGSGQCATMELGPLEGGYLELLNSSAD
PLQLYHLYDQTDLAREEIELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLDGLGKDIFIEHIGLEEMISESVEVEEAGQKSQKRPFPEELPVDLKHRKLAEPL
AVPVVTGTFLVGSVSDSSALPCLSPPAVFNKEPASSQSWLEEPVLMPVPPSSSLLSCLSL
PAGRIQIVPSLPSLPQGLWQISGAGTGVSGMVIYQGEMPQASQVLPSSGPAMQSLPKSPE
RPGSTSPFAPSAADLPGMPEPALTSRANMTEDQMSPTQCLTAHEVSSKPPKWPETVEQFC
SSLRDKYQAEPAGPEGILVEVELVRARLERNSSKSQERELATPDWAERQLARGGLAEVLL
AAGDRRRPRETQVIAVLGKAGQGKSHWAREVSRAWACGQLPQYDFVFYFPCHCLDRVKDT
YRLQDLLFCLGPQPQPVDEEVFGHILRRPDRVLLILDAFEGLEGQDSLLHSAGGPVSTEP
HSLRGLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADVLFEVTGFSAEQAETYVTHYL
ERAGATEHREQALALLHGQPFLLSHSHSPTVCRAVCRLSEALLELGGEAELPSTLTGLYV
GLLGPAARDSPPGALAGLARLAWELGRRHRGTLQDSQFPSAEVRAWAVARGLVQPIPGAP
DTELAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLL
FQPHADCLGALAGPAVATLGARKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDAGLW
QHVVQGLPARLSFLGTRLTPPNTYVLCSALAAAGRDFSLDLRSTGIDPSGLGSLVGLGCV
THFRASLSDTVGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRS
PSEDAAELPAVRDLKKLEFALGSVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEG
VEQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNSICDVGAES
LAHVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQL
DSRISLR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgcctcgggtccggatgctgctgtccagctatcgtccg
ggtcaggtgcaggccctcctggaccacatgctggagaaggagctcctgtcccaggagtac
cacggcgccctgctccgcgagcctgatggcgaggccctggccaggaagatctccttgacc
ttgctggaaaaaggagacccggacctggccctcttgaggtgggcatggagcgggtggcag
gccccagtggccgagagggaccccaactccaaggaccacagtggcagtggacagtgtgcc
accatggagttggggcctctagaaggcgggtacctggagcttctcaacagcagtgccgat
cccttgcagctctaccacctctatgaccagacagacctggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgaacagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtgttccaggactcccaactggacggtctgggcaaagacattttcattgagcacatagga
ttggaagaaatgatcagtgagagtgtggaggtggaggaagcagggcagaaaagtcagaaa
agacccttcccagaggaactgcccgtggacttgaagcacaggaagctggctgagcccctc
gctgtgcctgtggtgactggcacgttcctggttgggtcagtgagtgactcctcagccctg
ccctgcctgtcaccacctgccgtgttcaacaaggagccagcatccagccagagctggctg
gaggagcccgtcctgatgcctgtgcccccttccagttccttgctgagctgcctgagtctt
cctgctggacgcatccagatcgtccccagcctcccctccctgccccagggactctggcaa
atctcaggggctgggacaggggtgtctgggatggtcatctatcaaggcgagatgccccag
gccagccaagtgcttccttccagtggccccgccatgcagagcctccccaaatccccagag
cggcccggctccaccagcccctttgcgccgtctgcagctgaccttcctggcatgccagag
ccggctttgacctcccgggcaaatatgaccgaggaccagatgtcccctacgcaatgcctg
acagctcacgaggtctccagcaagcctccgaaatggcctgagacggtggagcagttctgc
agctccctacgggacaagtaccaggctgagcccgcaggcccggaaggcatcctggtggag
gtggagctggtgagggcgcggcttgaaagaaacagcagcaagagccaggagagggagctg
gccaccccggactgggcagagcggcagctggcccgtggggggctggccgaggtgctgcta
gctgcgggggaccgacggcggccgcgggagacacaggtgatcgccgtgctgggcaaagca
ggacagggcaagagccactgggcccgggaagtgagccgagcctgggcctgcggccagctg
ccccagtacgacttcgtcttctacttcccctgccactgtttggaccgtgtgaaggacact
taccgcctgcaggatctgctcttctgcctgggcccccagccacagcccgtggacgaggag
gtcttcggccacatcttgaggaggcctgaccgggttctgctcatcctggacgccttcgag
gggctcgagggccaagacagcctcctgcacagcgcaggtggacctgtgtccactgagccc
cactccctccgggggctgctggccggtctcttccagcgaaagctgctgcgaggctgcacc
ctgctgctcacggcccggccccggggccgcctggcccagagcctgagcaaggccgacgtc
ctgttcgaggtgaccggcttctcagccgagcaggccgagacctatgtgacgcactacttg
gagcgcgctggggcgaccgagcaccgagagcaagccctggcgctcctccacggccagccg
ttcctgctcagccacagccacagccccactgtgtgccgggccgtgtgccggctctccgag
gccctcctggagctgggcggcgaggctgagctgccctccacgctcacgggactctacgtg
ggcctgctgggccctgcggcccgcgacagccccccgggggctctggcaggactggccagg
ctggcgtgggagctgggccgcagacaccggggcaccctgcaggacagccagttcccgtcg
gcggaggtgagggcctgggccgtggccagaggcctggtgcagcccatcccgggggccccg
gacacggagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggctg
gcgctgagcacggaaatcaaggacaaggagctgccacagtacttggcattgaccccgagg
aagaagaggccctacgacaactggctggagggcgtgccgcgcttcctggctgggctgctg
ttccagccccacgccgactgcctcggagccctggccgggccggcggtggccaccttgggg
gccaggaagcagaaggtgctcagcaggtaccttaagcggctgcagccagggacgctacgg
gccggccggctgctggagctgctgcactgtgcccacgaagcttcggatgccgggctctgg
cagcacgtggtgcaggggctcccagcccgcctttccttcctgggcacccggctcacaccc
cccaacacttacgtgctgtgcagtgccttggcagcggcgggccgagacttctccctggac
ctccgcagcacgggcattgacccctctgggctggggagccttgtgggactcggctgtgtc
acccatttcagggcttcgctgagtgacacggtagggctctgggagtctctacagcagcgt
ggggagaccaagctactccgggcggtggaggagaagttcaccatcgagcctttcaaggcc
aagtccccgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacgaggagt
ccctcggaagacgcagctgaactccctgccgtccgggacctgaagaagctcgagtttgcg
ctgggctccgtcttgggcccccaggcttttcccaaactggtgaggatcctcgaggccttt
tcctcccttcagcatctggacctggactcgctgagcgagaacaagatcggggacgagggt
gttgagcagctgtcagccaccttccctcggctgaaggccctggagactctcaacttgtcc
cagaacagcattacggatgtgggtgcctgcaagctcgccgaggccttgccctccctggct
gcgtccctcctcaggctgagcctctacaataacagcatctgtgacgtgggagcggagagc
ctggcacacgtgcttccagacatggtgtctctccgggtgttggatgtacagtataacaag
ttcacggccgctggggctcagcagctcgccgccagcctcaggaagtgccctcatgtggag
acactggcgatgtggacgcccactatcccgtttggcgtccatgaacacctgcagcagcta
gactcacggatcagcctgagatga
DBGET
integrated database retrieval system
