Ursus arctos (brown bear): 113271138
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Entry
113271138 CDS
T05909
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
uah
Ursus arctos (brown bear)
Pathway
uah03020
RNA polymerase
uah03420
Nucleotide excision repair
uah05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113271138 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
113271138 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
113271138 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uah03021
]
113271138 (POLR2A)
03400 DNA repair and recombination proteins [BR:
uah03400
]
113271138 (POLR2A)
Enzymes [BR:
uah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113271138 (POLR2A)
Transcription machinery [BR:
uah03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113271138 (POLR2A)
DNA repair and recombination proteins [BR:
uah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113271138 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113271138
NCBI-ProteinID:
XP_026376645
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcggccccccctccggggacagcgcatgcccgctgcgcaccatcaagcga
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagagggcggt
atcaaataccccgagacgacagagggcggccgccccaagcttggggggctgatggacccg
aggcagggggtgatcgagcggactggccgctgccagacctgtgcaggaaacatgacagag
tgtcccggccactttggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacgatgaaagtgttgcgctgcgtctgcttcttctgctccaagttgctcgtggac
tctaacaacccaaagatcaaggacatcctggccaagtccaaggggcagcccaagaagcgg
ctgacacacgtgtatgacctgtgcaagggcaagaacatctgcgagggcggggaggagatg
gacaacaagttcggcgtggagcagccggagggcgacgaggacttgaccaaagagaagggc
cacggtggctgcgggcggtaccagccccggatccggcgctcgggcctggagctgtacgct
gagtggaagcacgtcaacgaggactcccaggagaagaagatcctgctgagtcccgagcga
gtgcacgagatcttcaagcgcatctcggacgaggagtgtttcgtgctgggcatggagccc
cgctacgcgcggcctgagtggatgattgtcaccgtgctgcccgtgcccccgctctctgtg
cggcctgccgtggtgatgcagggctctgcccgcaaccaggacgacctcactcacaagctg
gcggacatcgtgaagatcaacaaccagctgcggcgcaacgagcagaacggcgcagcggcc
cacgtcatcgccgaggacgtgaagctcctgcagttccacgtggccaccatggtggacaac
gagctgcccggcttgccccgcgccatgcagaagtctgggcgccccctcaagtccctaaag
cagcgcttgaagggcaaggaaggccgggtccggggaaacctgatgggcaagcgagtggac
ttctcggcccgcaccgtcatcacccccgaccccaacctctccatcgaccaggtcggcgtg
cctcgctccatcgctgccaacatgacctttgcggagattgtcacgcccttcaacatcgac
agacttcaggagctggtgcgcagggggaacagccagtacccaggggccaagtacatcatc
cgcgacaacggcgatcggattgacctgcgtttccaccccaagcccagtgatcttcacttg
cagaccggctacaaggtggagcggcacatgtgcgacggagacatcgtcatcttcaaccgg
cagccgactttgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
acttttcgtttaaatctgagtgtgacgacgccgtacaacgctgactttgacggggatgag
atgaacttgcacctgccacagtctctggagacccgggcagagatccaggagctcgctatg
gtgccacgcatgattgtgaccccccagagcaatcgccccgtcatgggcatcgtgcaagac
acactcacggccgtgcgcaaattcacaaagagagacgtcttcctggagcggggggaggtg
atgaacctcctgatgttcctgtccacgtgggacgggaaggtgccgcagccggccatcctg
aagccgcggcccctctggacgggcaaacagatcttctccctcatcatcccaggccacatc
aactgcatccgcacgcacagcacccatcccgacgacgaggacagcggtccctacaaacac
atctcccccggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctctcggcacgtcagctggctcgctggtccacatctcttacctggagatg
ggccacgatgtcacgcgcctcttctactccaacattcagaccgtcattaacaactggctt
ctcatcgagggtcataccattggcattggggactccatcgctgactctaagacctaccag
gacattcagaacactattaagaaggccaagcaggatgtgatagaggtcatcgagaaggct
cataacaacgagctggagcccaccccggggaacactctgcggcagacctttgagaaccag
gtgaaccgcattctcaacgatgcccgagacaagactggctcttctgcccagaagtccctg
tctgagtacaacaactttaagtccatggttgtgtctggagccaaaggttccaagatcaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggatcccgttt
ggattcaagcaccggactctgcctcacttcatcaaggatgactacgggcccgagagcaga
ggctttgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccacgcc
atggggggtcgcgaggggctcatcgacacggccgtcaagactgctgagactgggtacatc
cagcggcggctcatcaagtctatggagtcggtgatggtgaagtacgacgccaccgtgcgc
aactccatcaaccaggtggtacagctgcgctacggtgaggacggcctggctggcgagagc
gtcgagttccagaacctggctaccctgaagccgtccaacaaggcttttgagaagaagttc
cgcttcgactacaccaacgagagagctctgcggcgcactctgcaggaggacctggtgaag
gatgtcctgagcaatgcgcacattcagaacgagctggagcgggaattcgagcggatgcgt
gaagaccgggaggtgctcagggtcatcttcccaactggtgacagcaaggtggtcctcccc
tgtaacctgctgcgcatgatctggaacgcccagaagatcttccacatcaacccccgcctc
ccctccgacctgcaccccatcaaggtcgtagagggagtcaaggaactgagcaagaagctg
gtgatcgtgaacggggatgaccccctgagccggcaggcgcaggagaacgccacgcttctc
ttcaacatccacttgcggtccacgctgtgctcgcgccgcatggccgaggagttccggctc
agcggggaggccttcgactggctgctcggggagatcgagtccaagttcaaccaagccatc
gcccatcctggggagatggtgggcgccctggccgcacagtccctcggagaaccagccacc
cagatgaccttgaacacctttcactatgctggtgtgtctgccaagaacgtgaccctgggt
gtgccccgcctcaaggagctcatcaacatctccaagaagccgaagaccccttcgcttacc
gtcttcctgctgggccagtctgctcgagatgctgagagagccaaggacattctgtgccgt
ctggaacacacgacattgaggaaggtgaccgccaacacagccatctactacgaccccaac
ccccagagcacggtagtggcagaggatcaggagtgggtgaacgtctactatgagatgccg
gacttcgacgtggcccggatctccccatggcttttgcgggtggagctggaccggaagcac
atgactgaccggaagctgaccatggagcagattgccgagaagatcaatgccggtttcggc
gatgacttgaattgcatcttcaacgacgataacgctgagaagctggtgctccgaatccgc
atcatgaacagcgacgaaaacaagatgcaagaggaagaagaggtggtggacaagatggac
gacgatgttttcctacgctgcatcgagtccaacatgctgaccgatatgaccctgcagggc
atcgagcagatcagcaaggtgtatatgcacctgccgcagacggacaacaagaagaagatc
attatcacggaggatggggagttcaaggccctgcaggagtggatcctggagacagacggt
gtgagcctgatgcgggtgctgagtgagaaggacgtggaccctgtgcgcactacgtccaat
gacatcgtggagatcttcacggtgctgggcatcgaagccgtgcggaaggctctggagcgg
gagctgtaccatgtcatctcctttgacggttcctacgtcaattaccgccacttggctctt
ctgtgtgacaccatgacctgtcgcggccatttgatggccatcacccgacatggggtcaac
cgccaggatacgggccctctcatgaagtgctcttttgaggaaacggtggacgtgctgatg
gaggcagccgcgcacggagagagcgaccccatgaagggggtgtctgagaacatcatgctg
ggccagctcgccccggccggcaccggctgcttcgacctcctgctcgatgcggagaagtgc
aagtacggcatggagatccccaccaacatccccggcttgggggccgctggacccactggc
atgttcttcggctcagcgcccagtcccatgggaggaatctctccggccatgactccctgg
aaccagggcgcaactccagcctatggcgcctggtcccccagtgttgggagtggaatgacc
ccgggggcagccggcttctctcccagcgccgcctcagacgccagcggcttcagccccggg
tactcccccgcctggtctcccacgccaggctccccgggctcccctggcccctcgagcccg
tacatcccctcaccaggtggtgccatgtctcccagctactccccaacatcgcctgcctat
gagcctcgctcccctgggggctatacgcctcagagcccctcttactcccccacttcgccg
tcctactctcccacctctccgtcctactctccaactagtcctaactacagtcccacgtca
cccagctactccccgacctctcccagctactccccgacctcacctagctactctcccacc
tctcccagctactctccaacctctcccagctactccccaacctctcccagctactctcca
acctctcccagctactccccgacctctcccagctactcgcccacctctcccagctactcc
ccaacctctcccagctactcacccacttctcccagttactcgcccacgtccccgagctat
tcgcccacgtccccgagctactctcccacgtccccgagctattccccgacatccccgagc
tactcgccaaccagccctaactattctccaaccagtcctaattacaccccgacgtcaccc
agctatagcccgacatcacccagttactccccgacaagtcccaactacacacccacgagc
cctaactacagcccaacctctccaagttactctccaacttcacccagctactccccaacc
tcgccaagctactccccatcaagcccacggtacacaccacagtctccaacctacacccca
agctcccccagctacagccccagctccccgagctacagcccaacgtcgccgaagtacacc
cccaccagtccctcctacagccccagctccccggagtacaccccgacctcccccaaatat
tcgcctaccagcccaaaatactcgcccacctcccccaagtactcacccaccagccccacc
tactcgcccaccaccccaaagtactccccaacatcccctacttactcgccgacctctccg
gtgtataccccaacctcccccaagtactcgcctactagccccacctactcgcccacctcc
ccgaagtactcgcccaccagccccacctactcgcccacctcccccaaaggctctacctac
tcacccacttcccctggctactcgcccaccagccccacctacagcctcaccagtccggcc
atcagcccggacgacagtgatgaggagaactga
DBGET
integrated database retrieval system
