KEGG   Ursus arctos (brown bear): 125282548
Entry
125282548         CDS       T05909                                 
Name
(RefSeq) lysine-specific demethylase 5D isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
uah  Ursus arctos (brown bear)
Brite
KEGG Orthology (KO) [BR:uah00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:uah01009]
    125282548
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:uah03036]
    125282548
Enzymes [BR:uah01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     125282548
Protein phosphatases and associated proteins [BR:uah01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125282548
Chromosome and associated proteins [BR:uah03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125282548
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD PHD_JHD1 PHD_UBR7-like PHD_ash2p_like PHD_Pygo
Other DBs
NCBI-GeneID: 125282548
NCBI-ProteinID: XP_048069621
LinkDB
Position
Y:23314257..23344339
AA seq 1546 aa
MEPGSDDFLPPPECPVFEPTWTEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVM
EEGGYEAICKDRRWARVAQRLSYPPGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTHP
FHSEEKDKEYKPHSIPLRQSVQPSKFSSYSRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGVICSRTVLMKDEPREDVKVMSSLPREDLNHSVESCT
KMTMQLRRSHSRAQFIDSYLCRICSRGDEDDKLLLCDSCDDNYHIFCLMPPLPEIPRGVW
RCPKCIMAECKRPPEAFGFEQATQEYSLQSFGEMADSFKADYFNMPVHMVPTELVEKEFW
RLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKGNLSPEEEEYATSGWNLNVMPVLDQSV
LCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLE
EVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFN
QGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAV
HKEMFIMVQEERRLRKAVLEKGITEAEREAFELLPDDERQCMKCKTTCFLSALACYDCPD
GLVCLFHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKIRAESFDTWANKVRVALDVEDG
RKRSFEELRALESEARERRFPNSELLQRLRNCLNEAEACVSQVLGLVSGQDARIETPQPT
VTELRVLLEQMGSLPCAMHQIGDVKDVLEQVEAYQIEAREALASLPPSVGLLQSLLEKGQ
QLGIEVPEAYELQQQVEQAQWLDEVKQALAPSAQRGSLVIMQELLVTGAKIASSPSVDKA
RAELQELLTIAERWEEKAHFCLEARQKHPPAILEAIIREAENIPVYLPNIQALKDALAKA
QAWIADVDEIQNGDHYPCLDDLEGLVAIGRDLPVGLEELRQLEVQVLTAHSWREKASKTF
LKKNSCYTLLEVLCPCADAGSDTSKRSRWIEKELGFYRSDTELLGLSAQDLRDPGSVIVA
FKDGEQKEKEGILQLRRMNSSKPSPLASSRTASSATSICVCGQVPAGVGALQCDLCQDWF
HGQCVSVPRLLSSSRPSSTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILSLLVALQRLP
VRLPEGEALQCLTERAIVWQGRARQALASEDVTALLGQLAELRHQLQEEPTNCRLEESPT
YPATPDSDPHREGSGKDMPKQAPGLLSNVDSMTSHEKVAPVQGSGLEVLSSLLPQLTGPV
LNLPEATRAPLEELMLEGDLLEVTLDENHSIWQLLQAGQPPDVERIRTLLELEKPEHKGN
RTRGRALEKRRRRQQQKIDLGRKSKDLVQEELQSKKARNSGIKPKEGQEEFEDETDSENI
FLTSTDHRPILKGNQNTFHQNNSGSVVSFPSLTPLLHHSCPQQEEL
NT seq 4641 nt   +upstreamnt  +downstreamnt
atggagccggggtccgacgacttcctaccgccgccagagtgcccagtgttcgaacctacg
tggaccgaattccgagacccgcttggttacatcgcgaaaatcaggcctattgcagagaag
tcgggtatttgcaagattcgcccacccgcggactggcaacctccctttgcagtagaagtt
gacaacttcagattcacacctcgcattcagaggctaaatgaactggaggctcagaccaga
gtaaaactgaactatttggaccagattgcaaaattctgggaaatccaaggttcttcatta
aaaattcccaacgtggaacggaggatcttggatctctacagccttagtaagattgtgatg
gaggaaggtggctatgaagccatctgcaaggaccgtcgttgggcccgagttgcccaacga
ctcagctacccaccaggcaaaaatattggttctttgctacgatctcattatgagcgcatt
atttacccctatgaaatgtttcagtctggagccaaccttgtgcagtgtaacactcaccca
tttcacagtgaggaaaaagacaaggaatacaaaccccacagcattcccttaagacagtct
gtgcagccttccaagttcagtagctatagtcggcgggcaaaaagactacagcctgaccca
gaacctacagaggaagacattgagaagaatccagagctgaagaagctgcagatctatggg
gctggtcccaagatgatgggcttggggcttatggccaaggataagactttacggaagaaa
gataaagaaggggtcatatgctcccgcactgttctgatgaaggacgaaccaagagaggat
gtgaaagtgatgtcatcacttcccagagaggacttgaatcatagtgtagagtcctgcacc
aagatgacgatgcagctgaggaggagtcacagtagagcacagtttattgactcatatctc
tgtcgaatatgctcccgaggagatgaagatgataaactacttctctgtgatagctgcgat
gataattaccacatcttctgcctaatgccaccgcttcctgaaatccctagaggggtctgg
agatgcccaaagtgtatcatggcggagtgtaagaggccccctgaagcctttggctttgag
caggctacccaggagtacagtttgcagagctttggtgaaatggctgattccttcaaggcc
gactacttcaacatgcctgtgcatatggtacctacagaacttgtggagaaggagttttgg
agattggtgagcagcattgaggaagatgtgacggttgagtatggagcagacattcattcc
aaagaatttggcagtgggtttcctgtcagcagtagcaaagggaacctatcccctgaggaa
gaggaatacgcgaccagtggttggaatctgaatgtaatgccggtactagatcagtctgtt
ttgtgccacatcaatgcagacatctcaggcatgaaggttccctggctgtatgtaggcatg
gtattctcagcattttgttggcatattgaggatcactggagttactctattaactatctg
cattggggtgaaccgaaaacctggtatggggtaccctcattggcagcagagcagttggag
gaggtgatgaagaggctgacacctgagctatttgatagccagcctgacctgctacaccag
cttgtcaccctcatgaatcccaacaccctcatgtcccatggtgtaccagttgtccgcaca
aaccaatgtgcaggagaatttgtcatcacatttcctcgtgcttaccacagtggctttaac
caaggctataattttgctgaggctgtcaatttttgcactgcggactggctacctgctgga
cgccagtgcattgaacactaccgccggctccggcgctactgtgttttctcccatgaggag
ctcatctgtaagatggctgcctttccagagaagttggatctgaatttggctgtggcggtg
cacaaggagatgttcattatggtgcaagaggagcgacgtttacgaaaagctgtattggag
aagggcatcacggaggctgaacgagaggcttttgagctgctcccagatgatgaacgccag
tgcatgaagtgcaagacaacatgcttcctatcagctctagcatgctatgactgcccagat
ggccttgtctgccttttccacatcaatgacctctgcaagtgctcgagtagtcggcagtat
ctgcggtatcggtataccttggatgagcttcctgccatgctgcataagctaaagattcgg
gctgaatcctttgacacatgggccaacaaagtacgagtggctttggatgtggaggatggc
cgaaagcgcagctttgaagagctaagggcactggagtctgaggctcgtgagaggaggttt
cctaacagtgagctacttcagcgattgaggaactgcctaaatgaagcagaggcttgtgtc
tcccaagtcctggggctggtcagtggtcaagatgccaggattgaaactccacaaccaact
gtgactgagttacgagtacttcttgagcagatgggcagccttccatgtgccatgcatcaa
attggggatgttaaggatgttctggaacaggtggaggcctaccaaattgaggcccgagag
gccctggcctcactgccccccagtgtagggctgttgcagtccttgttggagaaggggcag
cagctgggtatagaggtgcctgaagcctatgagctccagcaacaggtggagcaggcacaa
tggctagacgaggtgaagcaggcactggctccttcagctcaaaggggctctcttgtcatc
atgcaggagctcttggttacaggtgccaagatagcctccagcccttctgtggacaaggcc
cgggcagagcttcaggagctgctgaccattgcagagcgctgggaagaaaaggcccatttc
tgcctggaggccaggcagaagcatccaccagctatattggaagccataatccgtgaggca
gaaaatatcccagtttacctgcctaatatccaagcactgaaagatgctctggctaaagca
caggcttggattgctgatgtggacgagatccaaaatggtgaccactacccctgcttggat
gacttggaaggcctggtggctataggccgggacctgcctgtgggtttggaagagctgaga
cagttggaggtgcaggtactgacagcacattcatggagggagaaggcctccaagactttc
ctcaagaagaattcatgctacaccctcctggaggtactctgcccatgtgcagatgctggc
tcagacaccagcaagcgtagccggtggatagagaaggaattgggcttctacagatctgac
acagagttgctgggactatctgcgcaggacctcagggatccaggctctgtgatcgtggcc
ttcaaggacggggagcaaaaggagaaggagggtatcctgcagctgcgtcgcatgaactcc
tccaagcccagtccattggcatcatcgagaacagcttcttctgcaacctccatctgtgtt
tgtgggcaggtgccagctggggtgggagctctgcagtgtgacctgtgtcaggactggttc
catgggcaatgtgtgtcagtaccccgactcctcagctcttcaaggcctagttccacctca
tcgccactgctggcctggtgggagtgggacaccaaatttttgtgtccactgtgcatgcgc
tcaaggcgcccacgtctggagaccatcctgtcattgctggtagccctgcagagactgcca
gtacggctgcctgagggtgaggccctacagtgcctcacagagagggccattgtctggcaa
ggccgtgccaggcaggctctagcatctgaggatgtgactgctctgttgggacagctggct
gagcttcgccaccaactgcaggaggaacccaccaactgcaggctggaggagtcccctacc
taccctgcaacccctgactctgatccacacagagaaggcagtgggaaggatatgcctaag
caggctccagggttgctgtcgaatgtggacagtatgaccagtcatgagaaggtagcccct
gttcagggctcaggcctggaggtattgtcctcactattgccacagttgactggccctgta
ttgaatctgcctgaggcaacccgagccccgctggaggagctcatgttggagggggatctg
cttgaggtgactctggatgagaatcatagcatttggcagctgctgcaagctggacagcct
ccagacgtggagcggattcgtacacttctagagctggagaagcctgagcataaaggaaat
cggacaagaggccgggcattggagaagcgaaggcggcggcaacagcagaaaatagatctg
ggtagaaaaagtaaagatcttgttcaagaagagctgcagtcaaaaaaggcccggaactca
gggattaagcctaaggagggccaagaagagtttgaggacgaaacagatagtgaaaatatt
ttcctgacatctacagaccatagacccatcttgaaagggaaccaaaatactttccaccag
aacaattcaggttctgtagtctcttttccttccttaacccctttgctacaccattcctgc
cctcaacaggaagagttatga

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