Ursus arctos (brown bear): 130543285
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Entry
130543285 CDS
T05909
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
uah
Ursus arctos (brown bear)
Pathway
uah02010
ABC transporters
uah04148
Efferocytosis
uah04975
Fat digestion and absorption
uah04979
Cholesterol metabolism
uah05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
uah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130543285
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130543285
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
130543285
04979 Cholesterol metabolism
130543285
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130543285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
uah02000
]
130543285
Transporters [BR:
uah02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130543285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
130543285
NCBI-ProteinID:
XP_057165922
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MEEEPTHLKLGVSIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILT
GLFPPTSGTAYILGKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKH
VKAEMEQMALDVGLPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYS
RRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYY
LTLVKKDVESSLSSCRNSSSTVSYLKKVVPELPPAGQSGGRGGEVQRLVALTQDVSAISN
LIRKHVAEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLE
EIFLKVAEESGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDVIDPNDSDVDPESRET
DLLSGMDGKGSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIILPAVFVCIALVFS
LIVPPFGKYPSLELQPWMYNEQYTFVSNDAPEDLGTQELLNALTRHPGFGTRCMEGNPIP
DMPCSVGEEEWTTAPVPQTITDLFQKGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLP
PPQRKQNTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSL
PSSQEVNNAIKQVKKHLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSF
LNVINNAILRANLQKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAM
SFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQ
QKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVAT
FVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLS
WDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVKRERQRILDG
GGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTV
TRGDAFLNKNSILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVG
EWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWN
CALSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRI
AGSNPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIED
YSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaacccacacacctgaagctgggcgtgtccattcagaacctgatgaaggtt
taccgggatggcatgaaggtggctgttgatggcctggccttgaatttctatgagggccag
atcacctccttcttgggccacaatggagctggaaagaccaccaccatgtcaatcctgact
gggttgttccctcccacctcaggcactgcctacatcctggggaaagacattcgctttgag
atgagcaccatccggcagaacctgggggtctgcccccagcataacgtgctgtttgacatg
ctgactgtggaagaacacatctggttctatgcacgtctgaaggggctctcggagaagcac
gtgaaagcagagatggagcagatggccttggatgtgggtttgccacccagcaaactgaaa
agcaaaacaagtcagctgtcaggtggaatgaagagaaagctgtctgtggctttggccttt
gttgggggatccaaggttgtcattctggacgagcctactgccggtgtggacccttactcc
cgcaggggaatatgggagctcctgctgaaatatcgacaaggccgcaccattattctgtcc
acgcaccacatggatgaagcggacatcctgggggacaggattgccatcatttcccatggg
aagctgtgctgtgtgggctcctccctgtttctgaagaaccagctgggaacaggctactac
ctgaccctggtcaagaaggatgtggaatcctccctcagttcctgtagaaatagcagtagc
actgtgtcgtacctgaaaaaggtggtgcctgagcttcccccagctgggcagagtggaggc
agaggaggagaggtgcagaggctggtggcgctgactcaagatgtctctgccatctccaac
ctcatcaggaagcacgtggctgaggccaggctagtggaagacattgggcatgaactgaca
tacgtgctgccctacgaagctgccaaagagggggcctttgtggaactcttccatgagatt
gatgaccggctctcagacctgggcatctctagttacggcatctcagagacgaccctggaa
gaaatatttctcaaagtggctgaagagagtggggtggatgctgagacctcagatggcacc
ttgccagcaagacgaaacagacgggccttcggggacaagcagagctgtcttcgcccattc
actgaagatgatgtcattgatcctaatgattctgatgtagacccagaatccagagaaaca
gacctgctcagcgggatggacggcaaaggctcctaccaggtgaagggctggaagctcaca
cagcagcagtttgtggcccttctgtggaagaggctgctgattgccagacggagtcggaag
ggattctttgctcagatcatcctgccagctgtgtttgtttgcattgccctggtgttcagc
ttgatcgtgcccccctttggcaagtaccccagcctggaacttcagccctggatgtacaat
gaacagtacacgtttgtcagtaatgatgctcctgaggacttgggcacccaggaactcttg
aatgccctcaccagacaccctggcttcgggacccgatgtatggaaggaaatccaatccca
gacatgccctgctcagtgggggaggaggagtggaccaccgccccagttccccagaccatc
acggacctcttccaaaaaggaaactggacaatggagaacccctcacccacctgccagtgt
agcagtgacaaaatcaagaagatgctgcccgtgtgtcccctaggggcaggggggctgcct
cctccacaaagaaaacagaacactgcagacatccttcagaacctgaccggaagaaacatt
tcagattatctggtgaagacctatgtgcagatcatagccaaaagtttaaagaacaagatc
tgggtgaatgagtttaggtatggagggttttccctgggtgccagtaattctcattcactt
ccttcaagtcaagaagttaataatgccatcaagcaagtgaagaagcacttgaagctggcc
aaggacagttctgcagatcgatttctcagcagcttgggaaggttcatgacaggactggac
acaaaaaataacgtcaaggtgtggttcaacaacaagggctggcatgccattagctctttc
ttgaatgtcatcaacaacgccattctccgggccaacctgcagaagggagagaaccccagc
cagtatgggattactgccttcaatcaccccctgaatctcaccaagcagcagctctcggaa
gtggctctgatgaccacatcagtggatgtcctcgtgtccatctgtgtcatcttcgcgatg
tccttcgtcccggccagctttgttgtgttcctgatccaagagcgggtcagcaaagcaaag
cacctgcagttcatcagtggagtgaagcctgtcatctactggctctccaattttgtgtgg
gatatgtgcaactacgtggtccctgccacgctggtcattatcatcttcatctgcttccag
cagaagtcctacgtgtcctctaccaacctgcctgtgctagcccttctacttctgctgtac
gggtggtcgatcacaccgctcatgtacccagcctctttcgtgttcaagatccccagcaca
gcctacgtggttctcaccagcgtgaacctcttcatcgggatcaacggcagtgtggccact
tttgtgctggagctctttaccaacaacaagctgaataacatcaatgatatcctgaaatct
gtattcttgatcttcccacatttttgcctgggacgggggctcattgacatggtgaaaaac
caagcaatggctgatgccttggaaaggtttggggagaaccgtttcgtttcgccactgtct
tgggacttagtgggacgaaacctcttcgccatggccgtggaaggggtggtgttcttcctt
atcactgttctcatccagtacagattcttcatcaggcccagacccgtaaatgcaaagctt
cctcctctgaatgatgaggatgaagatgtgaagcgggaaagacagagaattcttgatggt
ggaggacagaatgacatcttggaaatcaaggagctgacgaagatatatagaagaaagagg
aagcctgctgttgacaggatttgcgtgggcattcctcctggcgagtgctttgggcttctg
ggagttaatggggctgggaaatcatcaactttcaagatgttaactggagataccactgtt
accagaggagatgctttccttaacaaaaatagtatcttgtcagacatccacgaagtccat
cagaacatgggctattgccctcagttcgatgccatcacagagctgctgaccggaagagag
cacgtggagttctttgccctcttgagaggagtcccagaaaaagaagttggcaaggttggt
gaatgggcaattcggaaactgggcctcgtaaagtatggagaaaaatatgctggtaactat
agcggaggcaacaagcgcaagctctcaacggccatggctctgattggcgggccccctgta
gtgtttctggatgaacctaccacaggcatggaccccaaagcccggcgattcttgtggaat
tgtgccctaagtattgtcaaggaaggcagatcagtagtgcttacatctcacagtatggaa
gaatgtgaagctctttgcactaggatggcaattatggtcaatgggaggttcaggtgtctt
ggcagtgtccaacatctgaaaaatagatttggggatggttatacaatcgtggtacgaata
gcagggtccaaccctgacctgaagcctgtgcaggagttctttggacttgcctttccaggc
agtgtcctcaaggagaagcaccggaacatgctacagtaccagcttccatcctcactgtcc
tctctggccaggatattcagcatcctttcccagagcaagaagagactccacatagaagac
tactctgtttctcagacaacacttgaccaagtatttgtaaacttcgccaaggaccaaagt
gatgatgaccacttaaaggacttgtcattacacaaaaaccagacagtagtcgatgttgca
gttctcacatcttttctccaggatgagaaagtgaaagaaagttatgtatga
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