Candidatus Uabimicrobium amorphum: UABAM_00563
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Entry
UABAM_00563 CDS
T07685
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
uam
Candidatus Uabimicrobium amorphum
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uam03400
]
UABAM_00563
DNA repair and recombination proteins [BR:
uam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UABAM_00563
Archaeal homologous recombinant proteins
UABAM_00563
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
BBM82220
UniProt:
A0A5S9IJJ3
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All DBs
Position
808670..809848
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AA seq
392 aa
AA seq
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MIKFIHTGDWHVGKTIRGKHRGGEYRAILDELYDFIVAENIELLLVAGDIYDTPTPSAEA
ESIIYSFFHRVSSLGVKSIVVAGNHDSSLRFEAISQIMALANVTMVGKYDFENPQNCVCE
YTSKDGEDKLSIGLVPFIFERMFIRAQDIIDEKREETTMRYSRGMTYVLNEISKHFAADT
TQIMVGHLLMHGARPGGGERRLYLGDNYAVHPVAIPKNVSYFALAHVHMYQQIEGPCPTY
YCGSPLQMDFGEAEHEKGFLCGEIADGKVSTPRFIPFKSGVRLQSISGTIAELEDLLAED
NHNWDNFHLKITIKTDASTLGLSHKIKQQFPNAVDIRREFIGEDTKQLIAQDSPTWLPDL
YRDFHNNHYERAADPEIIEEFLQLYEECSEEE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaattcatccataccggtgactggcatgtaggtaaaaccatccgcggtaaacat
cgcggtggggaatatcgtgcaattttagacgagctatatgactttatcgttgcggaaaat
attgagcttcttcttgttgccggagatatttacgatactcctacgccatcggcggaggcc
gaaagtattatctatagcttttttcatcgcgtatcgtctttgggagtaaaatctattgtg
gtggcgggtaatcacgatagcagtttgcgttttgaggcgatctcgcagattatggcgttg
gcaaatgttaccatggtgggaaaatacgattttgaaaacccacaaaactgcgtgtgtgag
tatacctcgaaagatggggaagataaactctctataggtcttgttccctttatatttgag
agaatgttcattcgcgctcaagacattatcgatgaaaagcgcgaagaaacgacaatgcgt
tactctcgtggaatgacctatgtcttaaatgaaatcagtaaacatttcgctgcggacacc
acgcaaattatggtgggacatttgctcatgcatggagcgcgaccaggaggaggagaaagg
cgtctctatctgggggacaattatgccgtacacccggttgctattcccaaaaatgtgtcg
tatttcgcattggcgcacgtacacatgtaccagcagattgaaggaccttgtccgacttac
tactgtgggtcaccgctacaaatggattttggagaggccgaacacgaaaagggttttctg
tgcggagagattgccgatggtaaagtgagcacaccacgctttatcccttttaagtcaggc
gttcgcttacaatccatcagtggtactattgccgaattggaggatttactcgccgaagat
aatcacaactgggataattttcatctaaaaataaccataaagacagatgcctctactctt
ggtttatcacataaaatcaagcaacaatttcccaacgccgtggacattcgccgtgagttt
attggtgaagacacgaaacaactcatcgcccaagatagtcctacatggttacctgatttg
tatcgcgattttcataataatcattacgagagagccgcagatccagaaatcattgaggaa
tttttgcagttgtatgaggaatgttccgaagaagaataa
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