Candidatus Uabimicrobium amorphum: UABAM_01303
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Entry
UABAM_01303 CDS
T07685
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
uam
Candidatus Uabimicrobium amorphum
Pathway
uam03420
Nucleotide excision repair
uam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UABAM_01303
03430 Mismatch repair
UABAM_01303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uam03400
]
UABAM_01303
Enzymes [BR:
uam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UABAM_01303
DNA repair and recombination proteins [BR:
uam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UABAM_01303
MMR (mismatch excision repair)
Other MMR factors
UABAM_01303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
AAA_14
AAA_12
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
BBM82960
UniProt:
A0A5S9IK10
LinkDB
All DBs
Position
complement(1841556..1843520)
Genome browser
AA seq
654 aa
AA seq
DB search
MGQEIKAKFCIGLPVAKSMNFLQGLNKPQYEAVNHDEGPLLILAGPGSGKTRVITHRIAR
LVSTKIYSSQILALTFTNKAAKEMVKRVETITNYKIGWITTFHSFCSRILRKECEAIDYK
PDFTIYDADDQKKIIKQVLTELDIDLSIGVSKYQYAIGRYKNHGKSPEVILASRNYWDRL
IGKVYKTYQEMLQRNNAFDFDDLLLKTLELFQKNEDVLEFYQNKFQYLLIDEFQDTNEPQ
YQIAKLLAQEHKNICATGDPDQSIYSWRGANIQNILNFEKDFPDAKVIKLEQNYRSTRTI
LKVADSLISNNIFRKAKDLWTENDEGQPVKFVRADDEKHEAEIVRRQIQQLRGEHNLSDM
VVFYRTNAQSRIIETELVEANIPYTIVGGLEFYKRAEVKDVLAYLKFFANPVDEISLFRI
INNPPRGISKKCIKCLIEIARENDISIFEVMEAEALWTRMTTRQQNSLRKFMTIVRNVQE
KIDVPISQFIEIVVDETGYMKHIKKNDEKKEEERQANILELLASAKEYEKIHKDANLSNF
LQHISLLTDNEKENQDVDSLTLMTLHAAKGLEFPIVFIIGVAEGICPHSRSETQNEIEEE
RRLLFVGITRAKKMLTISYSRISSRGDTYGFRNSPSRFLKEIPVDLIERDNRYD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggggcaagaaattaaggccaaattttgcattggtcttcccgtcgccaagtcaatgaac
tttctacaaggattaaataaaccacagtatgaagctgtaaaccacgatgaaggaccgcta
ctcattttagcaggaccagggagtggaaaaacacgcgtcattacacatcgtatcgcacga
cttgtttctacaaaaatatactcttcccagatcctcgctttaacatttaccaataaagca
gctaaggaaatggtaaagcgtgtagaaaccatcaccaattacaaaattggttggatcaca
acatttcattccttttgttcgcgaatactacgcaaagaatgcgaagccatcgattacaaa
cctgacttcaccatttacgatgcagacgatcaaaaaaaaattatcaaacaagtacttacg
gaactagatatagatttatctatcggtgtcagtaagtatcaatatgcgatcggtcgttat
aaaaaccacggcaaatctcccgaagtgattcttgcgtcgcgaaattattgggatcgactc
atcggtaaagtttataaaacataccaagaaatgcttcaacgtaacaatgcttttgatttt
gacgatttgctattaaaaacactcgaactatttcaaaaaaacgaagacgtcctcgaattt
tatcaaaataaatttcaatatctgctaatagatgagtttcaggataccaacgagccacaa
taccaaattgcaaaattgttggcacaagagcacaaaaatatctgtgcaacaggcgatcca
gatcaatctatttactcatggcgtggggcaaatattcagaatattctaaattttgaaaaa
gatttccctgacgccaaagtgatcaaactcgaacaaaattaccgtagcacacgtacgatt
ttgaaagtagcggatagcttaatttccaataacatatttcgcaaagcaaaagacttatgg
acagagaatgacgagggccaacccgtcaagtttgtccgtgccgatgatgaaaagcacgaa
gccgaaattgttcgccgtcaaattcagcaattgcgaggcgaacacaacttatctgatatg
gttgttttctatcgaacaaacgcacaaagtcgtattatcgaaaccgaacttgttgaggcg
aatattccctacacaattgttggtggtctagagttttacaaaagagcggaagtaaaagat
gtgttggcatatcttaaattttttgcaaatcccgttgacgaaatttctttatttcgcata
ataaataatccaccacgagggattagcaaaaagtgcattaagtgcttgattgagattgct
cgcgaaaatgacattagtatatttgaagttatggaagccgaagctttatggacacgcatg
acaacacgtcaacaaaactcgctgcgtaaatttatgacgatcgtgcgtaatgtacaagaa
aaaatagatgtacctatttcgcaatttatcgaaattgttgttgatgaaacaggttacatg
aagcatattaaaaaaaatgatgaaaaaaaagaagaggaacgccaggcaaatattttagaa
cttttagcatcggcaaaagagtatgaaaagatccataaagatgctaatttatctaacttt
ttgcaacacatttctttgttaactgataacgaaaaagaaaatcaggatgttgactctctg
acacttatgacgttgcatgccgcaaagggtttggaatttcctattgtatttattattggt
gttgcggaaggaatctgcccgcatagtcgcagtgaaacacaaaacgagatagaagaagaa
cggcgccttctgtttgtgggaattaccagagcaaaaaaaatgctcaccatcagttatagt
cgcatttcctcacgaggagatacatatggttttcgtaactctccttcgcgctttttgaaa
gaaattcccgtggatctgattgaaagagataaccgatatgactaa
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