Candidatus Uabimicrobium amorphum: UABAM_01423
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Entry
UABAM_01423 CDS
T07685
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
uam
Candidatus Uabimicrobium amorphum
Pathway
uam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UABAM_01423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uam03019
]
UABAM_01423
Enzymes [BR:
uam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UABAM_01423
Messenger RNA biogenesis [BR:
uam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UABAM_01423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
AAA_30
AAA_19
Helicase_C_2
CLZ
Flavi_DEAD
TolA_bind_tri
AAA_22
Shikimate_DH
Cas3-like_C_2
EFM1_middle
Motif
Other DBs
NCBI-ProteinID:
BBM83073
UniProt:
A0A5S9F2F8
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All DBs
Position
1985748..1986992
Genome browser
AA seq
414 aa
AA seq
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MKQTNTTFNNYNLTKNILKDIAAMGFKTPTSIQAKCIPPALDGKDIIGLAQTGTGKTAAF
ALPIIQKVAHNMDMAALVLAPTRELAQQIAQTITNLGKSSGARVALLVGGTSIKEDSKAL
GSWPNILVATPGRLIDHIFSRTVDLSKIEILTIDEADHMHDMGFLPQIQQIIDVLPKKRQ
TMMFTATMSKKIEHFVRRSMHRPKRIEIGRVTPATRAEQKLFRVNEDEKLLLLMDLLSQK
SQRILIFARTKRKVDQLARRISALNKNVARLHGDYEQSQREMAMEGFRNGKYNILVATDI
AARGIDVANIEHVINYDFPSSAEDYIHRIGRTARATSSGLATSFVTRSDLSCLKHLEKMI
SSKLKLIHVGSENSKPYANKNRKNQNKNKHYNQKNKNHAKGKSQYNPRRRENKK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaaacaaacacaacgtttaataattacaatttaacgaaaaacattctaaaagat
attgcggcaatggggttcaagactcctacctcaatacaggcaaagtgcattccgcccgct
ttagacggaaaagatattatcggtttagcacaaacgggtacaggcaaaacggccgccttt
gcattgccgatcatacaaaaagttgctcataacatggacatggcagctttggtacttgca
ccaacacgtgaacttgcgcaacagattgcgcagactatcacaaatttgggaaaatcaagc
ggtgcacgcgtcgctcttttagttggtggcacatctattaaagaagactctaaagcttta
ggctcatggccaaatatacttgttgccacacctggtcgactcatcgaccacattttttcg
cgcacagttgatctttcaaaaattgaaatcctaaccattgatgaagcagatcacatgcac
gacatgggttttttaccacaaatccaacaaatcatagatgtattacccaaaaaacgccaa
acgatgatgttcacagcaactatgtccaaaaaaattgaacattttgttaggcgcagcatg
catcgccctaaacgcatagaaataggaagagtaactcctgcgacacgcgctgaacaaaaa
ctatttcgcgttaatgaagacgaaaagttactacttctcatggaccttttgagtcagaaa
tctcaacgaattttaattttcgcacgaaccaaaagaaaagtagaccagctcgctcgccgt
atttcggcactgaacaaaaatgtagctcgtttacatggtgactacgaacaatcacagcgt
gagatggccatggaaggttttcgcaacggcaaatacaatattttggttgccacagacatc
gctgctcgcggtattgatgttgccaatatagagcatgtaatcaactacgattttccaagt
agtgccgaagattacatccatcgcattggccgtacagcacgtgcgacatctagtggccta
gcaacgagttttgttactcgtagtgatttatcttgtctgaaacatttagaaaaaatgatt
tcttcaaaattgaagctgatccatgtgggatcagaaaattcaaaaccgtacgcaaacaaa
aatcgcaaaaatcagaataaaaacaaacattacaatcaaaaaaacaaaaaccacgcaaag
ggaaaatcgcagtataatccaagaaggcgtgaaaacaaaaaataa
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