KEGG   Candidatus Uabimicrobium amorphum: UABAM_01926
Entry
UABAM_01926       CDS       T07685                                 
Name
(GenBank) DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
uam  Candidatus Uabimicrobium amorphum
Pathway
uam03030  DNA replication
uam03410  Base excision repair
uam03420  Nucleotide excision repair
uam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:uam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    UABAM_01926
   03410 Base excision repair
    UABAM_01926
   03420 Nucleotide excision repair
    UABAM_01926
   03440 Homologous recombination
    UABAM_01926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:uam03032]
    UABAM_01926
   03400 DNA repair and recombination proteins [BR:uam03400]
    UABAM_01926
Enzymes [BR:uam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     UABAM_01926
DNA replication proteins [BR:uam03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     UABAM_01926
DNA repair and recombination proteins [BR:uam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     UABAM_01926
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UABAM_01926
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DUF3913 HHH_2 RNase_H_2 HHH_5
Other DBs
NCBI-ProteinID: BBM83573
UniProt: A0A5S9IKJ5
LinkDB
Position
2679498..2682161
AA seq 887 aa
MDSLYKRFFIIDAFAYIFRSYYAIKHIDYNAVYGFTNTLKKIIDEEKPEYIAVSFDSVEP
SFRNEIYSEYKANRQEPPEDLRPQIPLIKEVVSAFNIPLIEKSGYESDDIIGTLAREAQK
ESVQVVIVTGDKDMLQLVKGNDVVIFDPGRTSEYLEEKDIPGYFGCKPNQVIDLLTIWGD
SSDNIPGIPGIGEKGAKKLLEEYQSLDGIYENIDKIKRKSYREGLENSRDNIAMLRELVT
ICQDVPIDFSMEKFKFSGIDNARCQEIFTRLNFKRLLKDIPIELDKCTVDYALIDDEKKL
QELCKKLSKSKMFAFDIETDSLEPLDANIVGISFCTQKNDACYVPVAHIHQEKAWQEVVE
KHLKPIFANAEIQKGAHNVKFDYAVLTNRGWQCANICFDTMILSYLLEPNENRHGLDHLA
EKLLKYQTISFESVCGSGKKQISFAEADLEKAKQYASEDADICWQLYDVLQQKVTENDLQ
EVCEKIELPLVRVLAEMEKCGIRIDCELLNNMSQNMQRDIDALESEIYELAGQEFNIKST
QQLGYILFEKLQIPPLKKTSKTKSYSTGHDVLEKLADKGYDLPIKLLDYREVTKLKSTYV
DALPKLVHHQTDRVHTSFNQVVTATGRLSSTNPNLQNIPIRTDMGREIRAAFIPKEDYTL
ISADYSQIELRIMAHYSEDETLVNAFLKGEDIHLRTASEVFDIPIESVPAELRRAAKSIN
FGLLYGMGDFRLAQELNISRKEARNYIASYFEKMPRVQIFRDKIIEKTKELGHVRTYFGR
LRQIPEITSRNKTRQKQGERLAVNTVIQGTAADIIKLAMIELQKNLREKALQANLLLQVH
DELVVECARQEEQQLIDVLKESMENIVSLNVPLIVEAHSGPNWKDAK
NT seq 2664 nt   +upstreamnt  +downstreamnt
ttggacagcctatacaaacgtttttttattatagatgcatttgcttacatttttcgatcg
tattacgcaattaaacatatcgactacaatgctgtgtacggttttaccaatacactaaaa
aaaattatcgatgaagaaaaacccgaatatattgccgtgtctttcgattccgtagaacca
tcttttcgcaatgaaatttatagtgaatacaaagcaaatagacaagagccacccgaagat
ttacgaccacaaatacctctcattaaagaggtagtttccgctttcaatattcccctaatt
gaaaaaagcggctacgaatcagacgatatcatcggtacacttgcacgtgaagcacaaaag
gagagtgtacaagtagtcatcgttaccggggataaagatatgttgcaattggtaaaaggt
aacgatgtggtcatctttgaccccggacgcacgagcgagtatctcgaagaaaaagatata
ccaggctactttggctgtaaaccaaatcaggtgatagatcttttgaccatatggggagat
agttcagacaacataccaggcataccaggtattggcgaaaagggtgctaagaagctgtta
gaagaatatcaatctctagacggtatatatgaaaatatcgataaaatcaaacgtaagtca
taccgtgaaggattagaaaacagccgcgataatatcgcaatgctacgcgaactcgtcact
atttgtcaggatgtcccgatagacttttctatggaaaaatttaaattttcggggatcgat
aacgcgcgttgtcaggaaatatttacgcgattaaattttaagcgtcttctgaaagacatt
cccatagagcttgataagtgtactgtcgattatgcacttattgacgatgaaaagaagcta
caagaactatgcaaaaaacttagcaaatccaagatgtttgcctttgacattgaaactgac
tcgctagaaccactagatgcaaacatcgtgggaatttctttttgcacacaaaaaaacgat
gcctgttatgtaccggtagcgcatattcatcaagaaaaagcgtggcaagaagttgtggaa
aaacatctcaagcccatttttgccaatgcagagattcaaaaaggcgcgcacaatgttaag
tttgactacgcagttttgacaaatcgcggttggcagtgcgcaaatatatgttttgacaca
atgatactctcctacttgttagaaccaaacgaaaaccgacatggtcttgatcacctagca
gagaaattactaaaataccaaaccatttcctttgaaagcgtgtgtggctcgggaaagaaa
caaattagttttgccgaagcagacctcgaaaaagcaaaacagtatgccagcgaagacgcc
gatatatgttggcaactctacgacgttttgcagcaaaaggttacggaaaacgacttacaa
gaagtttgtgaaaaaattgaattgcccttggtacgtgttttggcagaaatggaaaaatgt
ggtattcgcattgactgtgaattattaaacaacatgtcacaaaatatgcaacgcgacata
gatgcgcttgaaagtgaaatatatgagcttgcaggacaagagtttaatataaagagtacg
caacaactcggctacattctctttgaaaagttacaaattcctccgttaaaaaagacgtcc
aaaacaaagtcctacagtaccggacacgacgtactagaaaagttagcagacaagggctat
gatctaccgatcaaacttctagattatcgtgaagttaccaaattaaaatcaacatatgtc
gatgctcttcccaaactagttcatcaccaaacagatcgcgtacatactagttttaaccaa
gtggtcacggcaacagggcgattatcatctacgaatcccaacttgcagaatatacctatt
cgcaccgacatgggtagagaaattcgcgcagcgtttattcccaaggaagactacacgctt
attagtgctgactactcacagattgaattgcgtattatggcacactattccgaagatgaa
acactggtaaacgctttccttaaaggtgaagatatccatttgcgcaccgcaagtgaagtg
tttgacattcccattgaatcagttcccgccgaattaagacgtgcggcgaagagtatcaac
tttggtttgttatatggtatgggagattttcgtttagcacaagagctaaatatttcgcgt
aaagaagcacgaaattatatagcgtcatattttgagaaaatgccacgcgttcagattttt
cgcgataagattatcgagaaaaccaaagagttaggacatgtacgcacatattttggtaga
ttaagacaaattccggaaattacctcgcgtaacaaaaccagacagaagcagggagaacgg
ttggcggtcaacacggtcattcaggggacagctgccgacatcatcaaacttgcaatgatt
gagttacaaaaaaacttacgagaaaaagcgttgcaagcgaatttacttttacaagtacac
gacgaattggttgtcgaatgtgcacgacaagaggaacaacaattgattgatgttttaaag
gaaagcatggaaaacattgtttcgctaaacgtacctcttattgtagaagcacatagtggt
cctaattggaaagatgcgaagtaa

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