Candidatus Uabimicrobium amorphum: UABAM_02273
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Entry
UABAM_02273 CDS
T07685
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
uam
Candidatus Uabimicrobium amorphum
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uam03016
]
UABAM_02273
Enzymes [BR:
uam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
UABAM_02273
Transfer RNA biogenesis [BR:
uam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UABAM_02273
Prokaryotic type
UABAM_02273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Barwin
Motif
Other DBs
NCBI-ProteinID:
BBM83918
UniProt:
A0A5S9F2Y1
LinkDB
All DBs
Position
complement(3159639..3160457)
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AA seq
272 aa
AA seq
DB search
MRYFFHIGYCGADYRGWQRQPQSISVQETIEQALRKVFARHIACIGCGRTDSLVNAQQYF
FHSDIPEGWNFDLVFRLNKILPDDIAIFDIHPVSLKAHAQFSATHRTYHYYIHTQKNPFL
SRVSALYLENHLDLERAGKACMLLTRYTDYAAFCKSPKKHNHTTCKVYNVRLSTNITQTR
IRFSIRADRFLRSMIRILVMRILFVAQKRLSIPEFENLFCSPCEGQFSTIAYPQGLHLAK
VEYPFLTVPAQSSVSEVEWIDVCHVKRGHENV
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagatatttttttcacattgggtactgcggcgctgactatcgtggctggcagcgtcaa
cctcaatctataagtgtacaggaaactattgaacaagccttgcggaaagtttttgctcgt
catattgcttgcataggctgtgggagaaccgattcacttgttaatgctcagcaatatttt
tttcacagtgatatacctgaaggttggaattttgatttggtatttcgtctgaacaaaata
ttacctgatgatatagcaatttttgatattcatcctgtttctctgaaagcgcatgcacag
tttagcgctactcatcggacttaccactactacattcacacccaaaaaaatcctttttta
agtcgtgtaagcgctttatatttagaaaatcatttagatcttgaaagggcaggaaaagcg
tgtatgcttttgacacgttacacagactacgctgctttttgtaagtcgccaaaaaaacac
aatcatacaacatgtaaggtatataacgttcgactatccacgaatattacacaaacgcgt
attcgtttttcgatacgtgcagatcgctttttgcgtagtatgattcgcattcttgttatg
aggatactttttgttgctcaaaagcgtctatctatccctgaatttgaaaatttattttgt
tcaccgtgtgagggacaattctctactattgcttaccctcagggactacatcttgccaag
gtagaatatccttttttgacagtgcctgcacagtcatctgtctcagaggttgaatggatt
gatgtttgccatgtaaagcgtggacatgaaaatgtttga
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