Candidatus Uabimicrobium amorphum: UABAM_03206
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Entry
UABAM_03206 CDS
T07685
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
uam
Candidatus Uabimicrobium amorphum
Pathway
uam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UABAM_03206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uam03019
]
UABAM_03206
03016 Transfer RNA biogenesis [BR:
uam03016
]
UABAM_03206
Enzymes [BR:
uam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UABAM_03206
Messenger RNA biogenesis [BR:
uam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UABAM_03206
Transfer RNA biogenesis [BR:
uam03016
]
Prokaryotic type
tRNA degradation factors
UABAM_03206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
KH_2
KH_NusA_2nd
KH_KhpA-B
S1_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
BBM84845
UniProt:
A0A5S9F3K9
LinkDB
All DBs
Position
complement(4364869..4367118)
Genome browser
AA seq
749 aa
AA seq
DB search
MSFIVEKEIAGKTLKIETGKMARLAAGSVTVQYGETIVLATVATKELDSNPGFLPLLVEY
KEKSASVGKIPGGFFKREGRPTTKEILTMRLVDRSIRPLFHKTMCSEIQVIALVLSADQE
NDPDIIAMIAATSAIAVAGLPFNGPVGSVRVGRIDGQFILNPTLEQLKESDINLVVSGTY
DAINMVEAGANEVDESVMTQAILWAHEQIRVIIGMQKELMQKCNVSFPEEQEPEVNEEET
NYYNILQKKYAANLEKSVQIHAKQERSLALKELLSQIKLDLVGEEESDENKEKEKLVKNA
YQKLTKDIVRRLITQGKRVDGRGLKDIRNITSEVGLIPRTHGSALFTRGETQSLVNVTLG
TSSDKQVIDGLHPEYHKRFILHYNFPPFCVGEVGFMRGPGRREIGHGALAERALEAVIPD
NERFPYTIRVVSDILESNGSSSMASVCGGTLSMMDAGVPIKKPVGGIAMGLVKEDDNFYI
LSDILGLEDHLGDMDFKVAGTQRGITALQMDIKITGIDRQILEQALSQAREGRIHILREM
MKALSRPRKEISKYAPRVVRMEIDPEKIALVIGPGGKNIRSIQETTGAKVDVENDGVITV
YCIKKEGALKAKEMIETLTEDLKVGKIYEGKVTSIKDFGAFVEIAPGLEGLVHVSELENS
FVQNVNDSVKVGDKISVKVLAIDDQNRVKLSKRAVDGPSSESEEETNEEDVPQKSTHSND
SEGTKRKHRNHKNHKKNYNRHKRNRHHKR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgagttttatcgtagaaaaagaaattgcaggaaaaacgttaaaaattgagactggtaag
atggcgcgtctagctgctgggtccgtaacagttcaatacggtgaaacgattgttctcgcc
actgttgcgacaaaagagctggattccaatccgggttttttaccactattagttgagtat
aaggaaaagagtgcgtcagtaggaaaaattcctggaggtttttttaaaagagaaggaaga
cctaccacaaaagaaattcttaccatgaggttagtggatcgctcgatacgtcctttattt
cataagactatgtgttctgaaatacaagtaattgcacttgttctttcggctgaccaagaa
aatgatccggacatcatcgcaatgattgcagcaacctctgccattgccgttgctgggttg
ccatttaacggtccagttggttcggtacgtgtaggacgaatagatggtcaatttattcta
aatcctaccctcgaacagttaaaggaaagtgatatcaatcttgtcgtttcgggaacatat
gatgcaatcaatatggtcgaagcgggggcaaatgaagttgatgaaagtgtcatgacacaa
gcaattttatgggcccacgaacaaattcgcgttattattggaatgcaaaaagaattgatg
cagaagtgtaacgtatcttttcctgaagaacaagaaccagaagtgaacgaagaagaaacc
aattactacaatattttgcaaaaaaaatatgcggcaaatttggaaaaaagtgtccaaatt
cacgcaaagcaagagcgttctttagctttaaaagagttgttatctcaaattaaactagat
ttagttggagaagaagaaagcgacgaaaacaaagaaaaagaaaagcttgtaaaaaatgcg
tatcaaaagttaaccaaagacatcgtacgtagactcattactcaaggtaagagagtggat
ggacgtggtttaaaagacatacgtaatataactagcgaagtaggtttaatcccacgaaca
cacggttcagcgctttttacaagaggtgaaactcaatctcttgtcaatgtaactttagga
acttcgagtgacaaacaagtcattgatggtcttcatcctgagtaccataagcgttttatt
cttcactacaactttccacctttctgcgtgggagaagtggggtttatgcgtggaccagga
cgtcgcgaaatcgggcatggcgctttagccgaaagagctttagaagccgttattccggac
aatgaacgttttccttacaccattcgtgtcgtttctgatatcctagaatctaatggatct
agctcaatggcgagtgtttgtggtggaactctatccatgatggatgcgggagtccccata
aaaaaacctgttggtggaattgccatgggtctcgtgaaagaagatgataacttttatatt
ctttccgatattctcggactggaagaccacctaggtgatatggactttaaagtagcagga
acccaaagaggtattaccgcgctacaaatggacataaaaatcactggtattgaccgccaa
atactcgaacaagctttaagtcaagcacgtgaaggccgcattcatatattacgcgagatg
atgaaagctcttagtcgtccacgtaaagaaatatccaaatatgcgccacgtgttgtacgt
atggaaatagatccagaaaagatagctcttgtcataggacctggaggcaaaaacattcgc
agcattcaagaaacaacaggtgctaaagttgatgtagaaaacgatggagttatcaccgtt
tactgcattaaaaaagagggagctctcaaagcaaaagaaatgatcgaaacattgacggaa
gatttaaaagttggtaagatttatgaaggaaaagtcacttcaattaaggattttggagca
tttgtagaaattgcgccaggacttgaaggacttgttcatgtctccgaactggaaaattcc
tttgtacaaaacgtcaatgacagtgtaaaagtaggagacaaaatttcggtaaaggttttg
gctattgatgatcaaaaccgcgtaaaactgagtaaaagagcagttgatggtccttcttct
gaaagcgaagaagaaacaaatgaagaagacgtaccgcaaaagtccactcattcaaacgac
agtgaagggacaaagcgcaaacaccgaaaccacaaaaaccacaagaaaaattacaatcga
cacaaaagaaatcgtcatcacaaaagataa
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