Candidatus Uabimicrobium amorphum: UABAM_03476
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Entry
UABAM_03476 CDS
T07685
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
uam
Candidatus Uabimicrobium amorphum
Pathway
uam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UABAM_03476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uam03019
]
UABAM_03476
03016 Transfer RNA biogenesis [BR:
uam03016
]
UABAM_03476
Enzymes [BR:
uam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UABAM_03476
Messenger RNA biogenesis [BR:
uam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UABAM_03476
Transfer RNA biogenesis [BR:
uam03016
]
Prokaryotic type
tRNA degradation factors
UABAM_03476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_2
KH-I_KHDC4-BBP
PCB_OB
Peptidase_M15_2
RB_A
Motif
Other DBs
NCBI-ProteinID:
BBM85113
UniProt:
A0A5S9F4H5
LinkDB
All DBs
Position
4718338..4720437
Genome browser
AA seq
699 aa
AA seq
DB search
MKSTTIEIGGKSVTFEHGEIARQADGAVIVKQGGTVLLATVVAADKANESLGFFPLTVEY
REKSAAAGKIPGGFIKRETRPQDREILASRLIDRSVRPLFPKAFLCETQVMVTVFSYDDD
ANPEPLAIMGAAAALHISDIPWAGPVCGVHIVKNGDSYSVLPTRQERETAQLDLMISCGK
EGLIMAEGLAEEAQESDVLTALEKAQQAMQPFFDMVDAWQKEANVEKRICEEPEKPAQEM
QDDIIGAVKEELLEAVLTKEKKKRSKNIKKVLSAHSEAFNEKYPEQEKDVAKILDDLHYN
LVRDYMINEKKRIDGRDFASIRAITGKVGWLPNVHGSSIFTRGETQALVSCTLGTPDDQQ
LVESLAGERRERFLLHYNFPSYSVGEVRPLRGPGRREIGHGNLALRALTNILPAQKEFVY
TVRLVSDISESNGSSSMATVCGGCLALMDAGVPISKPVAGIAMGLIQHNGETVVISDIMG
DEDHLGDMDFKVTGSKEGITALQLDNKIGSLPFSILEKALQQAKDGRVHILDEMAKILSE
TRGDLSDLAPRIVSTTIRKDRIRSLIGPGGKNVQSIQEACNVNININSDNGEVQVYATNM
QDCQKALKKIDEMVGDPEVGKIYRGKVTSVKDFGAFVKFFGEQEGLVHISELEKGRVQKV
RDVVNEGDAIIVKVLGIDRGKIKLSRREALDAKESDLAN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagcactactattgagattggtggaaagtctgtcacctttgaacatggtgaaatt
gcaagacaagccgacggagctgttattgtaaagcaaggcggtaccgttttattggcaact
gttgtagctgcggataaagcaaatgaaagtttagggttttttcctctgacagtagaatat
cgcgaaaagtctgctgcggcaggtaagattcccggaggtttcatcaagagagaaacgcgt
cctcaggatcgcgaaattttggccagtcgtttgatcgacaggtccgtacgaccacttttt
cctaaagcgttcttatgtgaaacgcaggttatggttaccgtatttagttatgatgatgat
gcgaatcccgagccactagccattatgggagctgctgcggcattacacatctccgatatt
ccatgggcaggacctgtttgtggggttcatattgtcaaaaatggcgattcttattccgtt
ttaccaacacgacaagagcgcgaaacagcacaacttgatttaatgatttcttgtgggaaa
gaaggactcattatggcagaagggctagcggaagaggctcaagaatcggatgttctgaca
gctttggaaaaagcacaacaggccatgcaacctttttttgatatggttgacgcgtggcaa
aaagaggcgaatgtcgaaaagagaatctgtgaagaaccggagaagcctgcccaggaaatg
caggacgacattatcggtgcagtaaaagaggaattgctcgaagcggtacttaccaaggaa
aaaaagaagcgcagtaaaaatataaagaaagttctctccgcgcatagtgaagcattcaat
gaaaaatatcccgaacaagagaaggacgtcgcaaaaattctcgatgacctacactacaac
ttagttcgcgattacatgatcaacgaaaagaaaagaatcgatgggcgtgattttgccagt
attcgcgcgattactggtaaagttggttggctgccaaatgttcacggatcatctattttt
actcgaggagaaacccaggcacttgtgtcttgtacattaggtactcctgatgaccaacaa
ctcgtggaaagtcttgcaggagagagacgcgaacgtttcttattgcactacaactttccg
tcctatagtgtgggagaagttcgtcccctgcgcggccctggacgacgtgaaataggccat
ggtaatttagccctacgcgcacttacgaatattttacctgcacaaaaagagttcgtttac
accgtacgtctagtttccgatatttcggaatccaacggttcatcgtcgatggcaactgta
tgtggcggatgcttggcactgatggatgctggtgtacctatttccaagccagtggcagga
atcgcgatgggacttatccagcacaatggcgaaacggttgttatctctgatattatggga
gatgaagatcatctcggcgatatggactttaaggtaactggttccaaggaaggaatcacg
gcgctacaactcgataataaaataggtagtttaccgttttctatcttagaaaaagcttta
caacaagctaaagatggtcgcgttcatatactagatgaaatggcgaaaattctcagtgaa
acccgaggtgatttgtctgatttggcaccgcgaattgtttcaacaaccattcgtaaagat
cgcattcgcagcttgataggcccaggtggaaaaaatgtacagtctatacaagaagcctgc
aatgtaaatatcaacatcaattctgacaacggagaagtgcaggtctacgccacgaacatg
caagattgccaaaaggctttgaagaaaatcgatgaaatggtgggagatcctgaagtcggt
aaaatctatcgtggaaaagtaacttccgtgaaagatttcggagcttttgttaagtttttc
ggcgaacaagaaggactagttcatatttcggaactcgagaaaggtcgtgtacagaaagta
cgcgatgttgtcaacgaaggtgatgccatcattgtcaaggttttgggaattgaccgtgga
aaaataaaactttctcgaagggaggctttagatgcgaaagaatccgacctcgcaaattaa
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