Candidatus Uabimicrobium amorphum: UABAM_03978
Help
Entry
UABAM_03978 CDS
T07685
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
uam
Candidatus Uabimicrobium amorphum
Pathway
uam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UABAM_03978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uam03021
]
UABAM_03978
03400 DNA repair and recombination proteins [BR:
uam03400
]
UABAM_03978
Enzymes [BR:
uam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UABAM_03978
Transcription machinery [BR:
uam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UABAM_03978
DNA repair and recombination proteins [BR:
uam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UABAM_03978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBM85604
UniProt:
A0A5S9IPP1
LinkDB
All DBs
Position
5393658..5394656
Genome browser
AA seq
332 aa
AA seq
DB search
MRIRWRDLELPTRVVCVKETLTPVYGEFIVEPFERGFGRSVGNSLRRILLSAIEGCAVTS
VKIKGVDHEFSTIPGVLEDVADIILNVKRIRLSVEDDTVVYIRKSEVGPVTAGDIQSDDD
SLEIHNKDLVVAHITEKTDLEIELQVRRGRGYVEAVENMREPQEIGVIPVDSIYSPVQHV
EYQIENTRVGKMTNYDRLILKITTDGTLAPEMVLVESAKILRKHLNPFVQYFELGQELQE
GPQEELISEADENLQKIKEKLLQPIEVLELSVRASNCLAAEGIRTIKDLVKRQESDMMKI
RNFGKTSLKEIKEKLIESSLSLGMQVDEILAS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagaattaggtggcgagatcttgaattacccacaagggtagtctgtgtaaaagaaact
cttacacctgtatatggagaatttatagtagagccttttgaaagaggatttggccgcagc
gtaggaaattcattaagacgtattttattatctgctatagaaggatgtgcagttacatct
gtaaaaattaagggagttgatcacgaattttcaacaattcccggcgtcttagaggatgtt
gcagatattattttaaacgtcaaaagaattcgtctatccgttgaagacgacactgtcgtt
tacataagaaaaagtgaagtgggacctgtgaccgcaggcgacatacaatcagatgatgat
agcctggaaattcacaataaagatcttgtagttgcgcatattacagaaaaaactgatctg
gaaatcgaattgcaagtaagacgtggaagaggttatgttgaagcagtcgagaatatgaga
gaacctcaagaaataggtgttatacctgttgattctatttattctcctgtacaacacgtt
gaatatcaaattgaaaatacacgtgttggaaaaatgacaaactatgatcgcttgatttta
aaaattaccactgatggaactcttgcaccggaaatggttcttgtcgaatcagcaaaaata
ttacgcaaacatttaaatccttttgttcaatattttgaattaggtcaggaacttcaagaa
ggtcctcaagaagaacttatttccgaagccgacgaaaacctacaaaagataaaagaaaaa
ttgttgcaacctatagaagtactagagttgagcgttcgcgcatctaactgtcttgctgct
gaagggattcgtactatcaaagatttagtgaaaaggcaagagtcagatatgatgaaaatt
cgcaattttggcaaaacttcgctaaaagaaataaaagaaaaactaatagagtccagcctt
tcgctaggtatgcaagtagatgaaattttagctagttaa
DBGET
integrated database retrieval system
