KEGG   Candidatus Uabimicrobium amorphum: UABAM_03982
Entry
UABAM_03982       CDS       T07685                                 
Name
(GenBank) ribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
uam  Candidatus Uabimicrobium amorphum
Brite
KEGG Orthology (KO) [BR:uam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:uam03016]
    UABAM_03982
Enzymes [BR:uam01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     UABAM_03982
Transfer RNA biogenesis [BR:uam03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    UABAM_03982
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: BBM85608
UniProt: A0A5S9IPB8
LinkDB
Position
5398661..5400625
AA seq 654 aa
MNSYVVVGVERRGLLLVAIVLKNNSNGKKIEVYTQDREKISIAARKILWNFNKQIEADNE
KNMRLKIAELIDEFAQQQIDIATLWELLDEGQSYSIENLLETYFTEYSDFDAGSLFVSLG
QNNLYFKLNNGKFEKNSPQNVESNLQRIQNEKARKQQEDMFIKWFISYHGNKEVPEEFVA
LLEKAKLYALHGELATSEVKKVGSLLGKTPDEMLLLLENKEVIKKNINQVVYRQGLQTKF
SPQVIAEVDEIISQEVNWEGRRVISDMWNIAIDDKETEEVDDAISYHEENGLFVVGVHIA
DVEATVKKDSALDSMAEDRFATVYFLDGKIPLFPMNLVKERLTLAENSPRATVSGFFYFD
YDGNLQKSKFEKTVLNLQRRATYEDSLKELGEDYHFCKLHELALKIRELRCENGAIITNF
PDSNINISDENNIEFKLISAATPAHTVVSEFMIYFNHILAQTMAKKGIPAFYRIQSINSP
VDSLVKDNPVYPIQLRRCLGGATLSSTPGKHATLGLNAYTQGTSPIRRYGDLLIHRQFFH
FMETNKMCYSSDDLRRKIASIEKGEKKIKVAENERYLFWFYKYLKQQKGKIFKGFVSKVF
DNNRVLVFFPDLFQEFSAKVEREDYAKEGREVSFRIQGASPRKQRLHLQHLVMK
NT seq 1965 nt   +upstreamnt  +downstreamnt
ttgaatagttatgttgttgtaggagtagaacgaagaggtcttttgctcgtagctattgtc
ttgaaaaataatagcaatggaaaaaaaatagaagtttacacccaggatagagaaaaaatc
agtatagctgctagaaaaatactatggaattttaacaaacaaatcgaagcagataatgaa
aaaaatatgcggttgaagatcgcagagttgattgatgaatttgcacaacaacaaattgat
attgctacgttatgggagcttttagacgaaggacaaagttatagcatcgaaaatcttttg
gagacgtactttaccgaatattctgattttgatgcaggatctctctttgtttctcttgga
caaaataacctttatttcaaattgaacaatggaaaatttgagaaaaattcaccgcagaat
gtcgagtcaaatcttcagagaattcaaaatgagaaagcacgtaaacaacaagaggacatg
tttatcaagtggtttatctcttatcatggcaataaagaagttcctgaagaattcgttgct
cttttggagaaagcaaaactatatgcgcttcatggagagctggcaacttcagaagtgaaa
aaagtgggaagtttacttgggaaaacacctgatgagatgttgttacttttagaaaacaaa
gaggtgataaaaaagaacatcaatcaagtggtatatcgccaaggattacaaacaaaattt
tctccacaagttattgccgaagtcgacgaaattatttcccaagaggtgaattgggaaggg
cgtcgtgtgattagcgacatgtggaatattgcaattgacgacaaggaaacggaagaggtc
gatgacgccatttcttaccatgaagaaaatggtctattcgtggttggtgttcacattgcc
gatgtagaagcaaccgtaaaaaaagacagcgccttagactctatggcggaagatcgtttt
gcgactgtatattttctcgacggcaaaatacctctgtttcccatgaatttggtgaaagaa
cgcttaaccttagcagaaaattctccccgggcaactgtgtctggttttttttattttgac
tacgacggaaatttgcaaaaaagtaagtttgagaaaacagttctcaatctgcaaagaaga
gcgacatatgaagatagtctaaaagaactgggcgaggactatcatttttgcaaactacat
gaacttgccttgaaaattcgcgaactgcgctgtgaaaatggtgcgattatcactaacttt
ccggactcgaatattaatatcagtgatgaaaataacatcgaatttaaacttatctctgcc
gcaactcctgcgcatactgtcgtttcggagtttatgatttatttcaaccatattcttgcc
caaacaatggcaaaaaaaggtattcccgctttttatcgcatacaatctatcaatagtcct
gtggatagtttggtaaaagacaatccggtgtatcccattcagttgcgccgttgtttagga
ggtgcaacgctttcctcgacacctggtaaacatgctaccttgggacttaacgcctataca
caaggaacttcgcctattcgtcgttatggagatttacttatccatcgacagttttttcat
tttatggaaaccaacaaaatgtgctattcctccgacgatttacgacgcaaaatagcatcg
attgaaaagggggagaagaagatcaaggtcgcggaaaatgagcgctatttattctggttt
tacaaatatttgaagcagcaaaaaggcaaaatttttaaaggatttgtttcgaaagttttt
gacaataaccgcgtgttagtatttttccccgatttatttcaagagttttctgcaaaagta
gaacgcgaggactatgcgaaagaggggcgtgaagtttcatttcgcattcaaggagcgtct
ccaagaaaacaaaggcttcatttacaacatctagttatgaagtag

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