Candidatus Uabimicrobium amorphum: UABAM_03982
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Entry
UABAM_03982 CDS
T07685
Name
(GenBank) ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
uam
Candidatus Uabimicrobium amorphum
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uam03016
]
UABAM_03982
Enzymes [BR:
uam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
UABAM_03982
Transfer RNA biogenesis [BR:
uam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
UABAM_03982
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
BBM85608
UniProt:
A0A5S9IPB8
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Position
5398661..5400625
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AA seq
654 aa
AA seq
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MNSYVVVGVERRGLLLVAIVLKNNSNGKKIEVYTQDREKISIAARKILWNFNKQIEADNE
KNMRLKIAELIDEFAQQQIDIATLWELLDEGQSYSIENLLETYFTEYSDFDAGSLFVSLG
QNNLYFKLNNGKFEKNSPQNVESNLQRIQNEKARKQQEDMFIKWFISYHGNKEVPEEFVA
LLEKAKLYALHGELATSEVKKVGSLLGKTPDEMLLLLENKEVIKKNINQVVYRQGLQTKF
SPQVIAEVDEIISQEVNWEGRRVISDMWNIAIDDKETEEVDDAISYHEENGLFVVGVHIA
DVEATVKKDSALDSMAEDRFATVYFLDGKIPLFPMNLVKERLTLAENSPRATVSGFFYFD
YDGNLQKSKFEKTVLNLQRRATYEDSLKELGEDYHFCKLHELALKIRELRCENGAIITNF
PDSNINISDENNIEFKLISAATPAHTVVSEFMIYFNHILAQTMAKKGIPAFYRIQSINSP
VDSLVKDNPVYPIQLRRCLGGATLSSTPGKHATLGLNAYTQGTSPIRRYGDLLIHRQFFH
FMETNKMCYSSDDLRRKIASIEKGEKKIKVAENERYLFWFYKYLKQQKGKIFKGFVSKVF
DNNRVLVFFPDLFQEFSAKVEREDYAKEGREVSFRIQGASPRKQRLHLQHLVMK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagttatgttgttgtaggagtagaacgaagaggtcttttgctcgtagctattgtc
ttgaaaaataatagcaatggaaaaaaaatagaagtttacacccaggatagagaaaaaatc
agtatagctgctagaaaaatactatggaattttaacaaacaaatcgaagcagataatgaa
aaaaatatgcggttgaagatcgcagagttgattgatgaatttgcacaacaacaaattgat
attgctacgttatgggagcttttagacgaaggacaaagttatagcatcgaaaatcttttg
gagacgtactttaccgaatattctgattttgatgcaggatctctctttgtttctcttgga
caaaataacctttatttcaaattgaacaatggaaaatttgagaaaaattcaccgcagaat
gtcgagtcaaatcttcagagaattcaaaatgagaaagcacgtaaacaacaagaggacatg
tttatcaagtggtttatctcttatcatggcaataaagaagttcctgaagaattcgttgct
cttttggagaaagcaaaactatatgcgcttcatggagagctggcaacttcagaagtgaaa
aaagtgggaagtttacttgggaaaacacctgatgagatgttgttacttttagaaaacaaa
gaggtgataaaaaagaacatcaatcaagtggtatatcgccaaggattacaaacaaaattt
tctccacaagttattgccgaagtcgacgaaattatttcccaagaggtgaattgggaaggg
cgtcgtgtgattagcgacatgtggaatattgcaattgacgacaaggaaacggaagaggtc
gatgacgccatttcttaccatgaagaaaatggtctattcgtggttggtgttcacattgcc
gatgtagaagcaaccgtaaaaaaagacagcgccttagactctatggcggaagatcgtttt
gcgactgtatattttctcgacggcaaaatacctctgtttcccatgaatttggtgaaagaa
cgcttaaccttagcagaaaattctccccgggcaactgtgtctggttttttttattttgac
tacgacggaaatttgcaaaaaagtaagtttgagaaaacagttctcaatctgcaaagaaga
gcgacatatgaagatagtctaaaagaactgggcgaggactatcatttttgcaaactacat
gaacttgccttgaaaattcgcgaactgcgctgtgaaaatggtgcgattatcactaacttt
ccggactcgaatattaatatcagtgatgaaaataacatcgaatttaaacttatctctgcc
gcaactcctgcgcatactgtcgtttcggagtttatgatttatttcaaccatattcttgcc
caaacaatggcaaaaaaaggtattcccgctttttatcgcatacaatctatcaatagtcct
gtggatagtttggtaaaagacaatccggtgtatcccattcagttgcgccgttgtttagga
ggtgcaacgctttcctcgacacctggtaaacatgctaccttgggacttaacgcctataca
caaggaacttcgcctattcgtcgttatggagatttacttatccatcgacagttttttcat
tttatggaaaccaacaaaatgtgctattcctccgacgatttacgacgcaaaatagcatcg
attgaaaagggggagaagaagatcaaggtcgcggaaaatgagcgctatttattctggttt
tacaaatatttgaagcagcaaaaaggcaaaatttttaaaggatttgtttcgaaagttttt
gacaataaccgcgtgttagtatttttccccgatttatttcaagagttttctgcaaaagta
gaacgcgaggactatgcgaaagaggggcgtgaagtttcatttcgcattcaaggagcgtct
ccaagaaaacaaaggcttcatttacaacatctagttatgaagtag
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