Candidatus Uabimicrobium amorphum: UABAM_04319
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Entry
UABAM_04319 CDS
T07685
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
uam
Candidatus Uabimicrobium amorphum
Pathway
uam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UABAM_04319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uam03400
]
UABAM_04319
Enzymes [BR:
uam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UABAM_04319
DNA repair and recombination proteins [BR:
uam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UABAM_04319
RecFOR pathway proteins
UABAM_04319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Rad17
Mg_chelatase
Sigma54_activat
AAA_3
TIP49
AAA_14
nSTAND3
Sigma54_activ_2
TsaE
AAA_22
NTPase_1
AAA_18
MCM
NB-ARC
RNA_helicase
AAA_17
AAA_PrkA
bpMoxR
AAA_33
ABC_tran
AAA_28
AAA_19
NACHT
NPHP3_N
Zeta_toxin
Cytidylate_kin
KAP_NTPase
DUF815
Motif
Other DBs
NCBI-ProteinID:
BBM85933
UniProt:
A0A5S9IPX6
LinkDB
All DBs
Position
complement(5879041..5880072)
Genome browser
AA seq
343 aa
AA seq
DB search
MEEDRSLSKNELEEDHELEASLRPLSFDQFVGQTQVISNLQTYIKAATLREEVLDHVLLS
GPPGLGKTTLARIISRELGAQITITSGPVLKIAGDLAGILTNLAHGDILFIDEIHRMYPA
VEEFLYSAMEDFSIDIMIDQGPSARSINLKLKPFTLIGATTREGLLTAPFRARFLIHEKM
SLYPVDDLFKIIQRSAKILNCSITDQGAMMIASRCRGTPRVANRFLRRIRDVAQVHTEDG
VVDDKVAAQGLAMLGVDESGLDKTDRRILQTIIDYGGGPVGLKTLAIAVGEEDDSIESVY
EPFLIQEGFLQKTSRGRKVTMKAYDAMGVKTQRQDSLFDGFDS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatagatccttatcgaaaaacgaactagaagaagaccacgaactagaagcc
agtctgcgaccactaagtttcgaccaatttgttggccagacacaggttataagtaatcta
caaacgtatataaaagccgccaccttacgcgaagaagtactcgatcacgttcttctttca
ggtccaccaggcttgggaaaaaccacactagcacgcatcatctcccgagaactgggtgca
caaatcaccatcacctccggacccgtgctaaaaatagctggagacctagcgggaattctc
accaatctcgcccacggagacatcctattcatagacgaaattcatcgtatgtaccctgcg
gtagaagagtttctatactcggcaatggaagacttctccattgacatcatgattgaccaa
ggaccaagtgcgcgctccattaacttaaagctaaaaccattcaccttaataggtgcgaca
acacgcgaaggcttactcactgccccatttcgtgcacgttttctcatccatgaaaagatg
tcactgtatcctgtagatgacctattcaagatcatacaacgcagcgcaaaaatacttaac
tgctccattaccgaccaaggtgctatgatgatcgccagtcgctgccgtggaacacctcgc
gttgccaaccgttttctgcgtcgtattcgcgacgtggcccaagtgcatacagaagacggc
gttgtcgacgacaaggttgctgcccaaggactcgcgatgttgggagttgacgaaagtggt
ctcgacaagaccgaccgtagaatactgcaaaccatcatcgattacggaggtggaccagta
gggttaaaaacactagcgattgcggtaggagaagaagacgatagcattgaatcggtgtat
gaaccgtttttgatacaagagggctttctacaaaaaacctcacgtggtcgtaaggtcaca
atgaaagcgtatgacgccatgggagtcaaaacccaacgtcaagatagcctgtttgatggc
tttgatagttag
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