Candidatus Uabimicrobium amorphum: UABAM_04437
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Entry
UABAM_04437 CDS
T07685
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
uam
Candidatus Uabimicrobium amorphum
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uam03032
]
UABAM_04437
03400 DNA repair and recombination proteins [BR:
uam03400
]
UABAM_04437
Enzymes [BR:
uam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UABAM_04437
DNA replication proteins [BR:
uam03032
]
Prokaryotic type
DNA Topoisomerases
UABAM_04437
DNA repair and recombination proteins [BR:
uam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UABAM_04437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6026
CD1375-like
Motif
Other DBs
NCBI-ProteinID:
BBM86051
UniProt:
A0A5S9IRD9
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Position
complement(6039127..6041712)
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AA seq
861 aa
AA seq
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MTDTKQCPVVRLEDELKNSYLTYAMSVIVSRALPDVRDGMKPSQRRILLAMNDLNLGPSS
KFRKCAKIAGDTSGNYHPHGEAVVYPTLVRMAQNFNMRYPLIQGQGNFGSIDGDPPAAMR
YTEARLTAPSVNMLEDMDKDTVDFVSNYDETREEPTVLPAKFPNLLVNGSVGIAVGMSTS
IPPNNLTEICDGIIELIENPDIEVEALCEIIKGPDFPTGAIICGEKDVRKAYTTGRGIVK
VRSKAEVEEKKNGRESIVFKEIPYQLNKAKVIEKIADLVKDGKITGISDVRDESGRKEPV
RIVVDLKRGENSDVILNQLYKYTLLQSSFSIIMLALVNGRPQLLNIKEMIYHFVEHRKEI
IRRRTLFLLKKAEKRHHIVKGLILALNHIDEVIKVIRGSQDTKEAKSSLREKWQLSVQQA
DAIVQMRLGALTNLEFNKLDDERKTLEEQIATFKGILEDPQKILAIIKEETIAIRDKYGD
KRRTKIGTAIEAFVLEDIIADDQSVVLITHEGYIKRTPVDTYSKQHRGGKGVTGTGMKQG
DIVKDFFIASAHQYILFFSNYGKVYWLKVYDIPEMSRTAKGRALVNLLNLDNDENISSVI
PVREFDSRWLVMATRQGIIKKTALSAFSRPNKSGIRAINLDEGDRLISTVLTDGEQDLII
GTKLGRACRFNETEVRPLGRAARGVRGCKLLENDIVIGMVVVRDDHSLLTICEKGYGKRS
AYESYRLTRRGVQGVLNFRRTDKTGDVVAIVSVRDEEQVMIITSKGMVIRMGTASLRILS
RATQGVRLIRLKKNDSVVSVAKLTKEILEDMGEDSSVTEASETEAEADNGEVANEETSEK
SSEESSEEPSEETAVESTESE
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacaaagcagtgtcctgttgttcggttagaagacgaactaaaaaactcttat
ttaacctatgcgatgagtgtaatcgtatcacgggcattacctgatgttcgtgacggtatg
aaaccatcacaaaggcgtattctcctggcaatgaacgatttgaatcttggaccatcatca
aaattcagaaagtgtgcaaaaatagccggggatacttcgggtaactatcacccacacggt
gaagcggtagtttatcccacactagttagaatggcacagaactttaatatgcgttacccg
ttaatccagggacagggaaacttcggatctatcgatggagaccctccggcagcgatgcgt
tatacggaagcgcgtttaacagctccaagtgtcaatatgctagaagatatggacaaagat
acggttgattttgtatctaactacgatgaaacacgtgaagagccaacggttcttcccgct
aaatttcctaatttattggtcaacggttctgtgggaattgcggtggggatgtcgacgtct
attcctcccaataacttaaccgaaatatgcgatggaatcatcgaattaattgaaaaccct
gacattgaagtagaggccctatgtgagattattaaaggacctgattttcccacaggagct
attatttgcggtgaaaaggatgtacgtaaagcctacaccacaggacgaggtatagtcaaa
gtacgatccaaggccgaagtagaagaaaaaaagaatggtcgcgaatcgatagtattcaaa
gaaattccttaccagcttaacaaagcaaaagtgattgaaaaaatagctgatcttgtaaaa
gacggtaaaataacaggtatttctgatgtgcgcgatgaaagtggacgcaaagaacctgtg
cgtattgttgtggatttaaagcgcggggaaaatagtgatgtcatcctcaatcaactttat
aaatacacactactacaatctagtttttcgattattatgttggctctagtcaacggtcga
ccgcaactactaaacataaaagaaatgatttatcattttgttgaacaccgcaaagaaatc
attcgtcgtcgtacactattcttactaaaaaaagcggaaaagcgccatcacatcgtaaag
ggtctaatcctagcattaaaccacattgatgaagtgatcaaagtaattcgtggatctcaa
gatacaaaggaagccaaaagctctttacgcgagaaatggcaactcagcgttcaacaagcg
gatgcgattgtgcagatgcgtctaggtgctctaaccaatctagagtttaataaactcgac
gatgaaagaaaaaccttggaagaacaaattgcaacatttaaaggaattctcgaagatccg
caaaaaattctagcgatcatcaaagaagaaaccatcgcaattcgtgacaaatacggagac
aaaagacgtacgaaaattggcactgcaatcgaagcctttgttttggaagatatcattgcc
gatgatcaatccgtcgttctaatcactcacgaaggatatattaagcgtacccctgttgat
acttactccaagcaacatcgaggaggaaaaggtgtcacgggaacgggaatgaaacaagga
gatatcgtcaaagacttcttcattgcttccgcgcatcaatatattctgttctttagtaac
tatggaaaagtgtactggttaaaagtgtatgatataccagaaatgtcacgaaccgcaaaa
ggaagagctcttgtcaaccttcttaatcttgacaacgacgaaaatattagctcggtcatt
cctgttcgtgaatttgacagtcggtggttggtgatggccacgagacaaggtatcatcaaa
aaaacagcactctctgcattttctcgtccgaataaaagtggtattcgtgctattaatctc
gatgaaggtgatcgtctaatctccaccgttcttacagacggagagcaagatctcatcatc
ggtacgaaactaggacgtgcatgccgctttaatgaaacagaagtacgccccttaggtcgc
gcggcccgaggagtacgcggatgtaaacttttagaaaacgacatcgtcattggtatggtt
gtggttcgcgatgaccacagtttactaactatctgtgaaaaaggttatggaaaacgttct
gcgtatgaatcttatcgtttaacaagaagaggtgtacaaggggttttaaatttccgacgc
acggataaaacaggtgatgttgtggccattgtttccgtaagagacgaagagcaagtcatg
atcataacaagtaaaggaatggtaatccgcatgggtactgcttctttacgcatcttatcg
cgagccacacaaggggtgaggttgatcagactcaaaaagaacgacagtgtcgtctccgta
gcgaaacttacgaaagaaattcttgaagatatgggagaagactcttcggtaaccgaagct
tcagaaacagaagccgaagctgataatggtgaggttgcaaatgaagaaacttccgaaaag
tcttccgaggaatcttcagaagaaccctcagaagaaaccgcagtagaatccacagaatca
gaataa
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