Candidatus Uabimicrobium amorphum: UABAM_05528
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Entry
UABAM_05528 CDS
T07685
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
uam
Candidatus Uabimicrobium amorphum
Brite
KEGG Orthology (KO) [BR:
uam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uam03021
]
UABAM_05528
Transcription machinery [BR:
uam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
UABAM_05528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
DEAD
ResIII
Helicase_C_2
Cas3-like_C_2
SLFN-g3_helicase
DUF6710
Motif
Other DBs
NCBI-ProteinID:
BBM87125
UniProt:
A0A5S9F5R3
LinkDB
All DBs
Position
complement(7796802..7799939)
Genome browser
AA seq
1045 aa
AA seq
DB search
MEPIPGKKVLIKGQEKLGFGNIYCYPGVDGIVEVHFFISPTHFESIQIHKSQLIYQMIPR
QTCCFQTNENVSYGRILLCSNEDKNFRSYQITFDNQKAPIEFREDDFQVRSCWPSSPEKM
LEELVQGTPFFFHQRYKLLEQLIYHRQLCEGITSFTSSKVELFSHQIEIASRILRDPNIR
YLLADEVGLGKTIETGIILKQVLLDSPQTMIKIYVPTALVWQWKEELKRRFSITNISVVE
HNDLLTNSNSQLDLVVVDEAHRIVTAKKSSSEKAPLYEAFCKLAKKTRHILLLSATPVLH
CESQLLALLHLLTPETYQLEHIEVFRERLAKRQEIGRVLLALSKAKNPLLLKRHAKKLSV
ILPRDKTISSLVNQVYEAKKDDIIKVVKSLQIHISETYRIHRRMLRTRRAWMTEDHGLCS
RKVALSYEFELNDELLEFLWENLENWRIEVASNISQQIDLQKNIDLYFEISEIIASDTML
LSKKIKKLLVDNPKQEGAYILQKMCDAVEKKWPEDRIFLIQEILKQLNSKKTLQKYVVFC
STVELCNKIEERLKKTFKNHLYVLHEQMSAEYSQKIIQGFKKSNRNSFLIVDSSLEEGVN
LHFATGIILFDIPWSPMRIEQRLGRLDRISRTENIPCKVIVTLDNEELAVDDAWRRLLVE
GYGIFNDSVSDIQFLIDEQMPYLKQRTFEGGPSALVSAIGELKSKIEEERLRIVEQDVVD
GMYTLRKVNEMFKNLDMGDNEEVKNKTLSKALISYLKDNVGLRPIKVNRDTFKFTLPKRK
EPLIPFNYLDEMQSLFQEGTSIRNVATIRNSGLQFFRPGHRGLDICHELLKKDDRGRCFV
LWRKCYGRIDPCIIFRIILNVYPNLDPIIKFLNEHDWDDIARGGLLRMIKGWFNEYLYEL
FLDVEGEIAKLDLIEICKKPYKAPPDINMGKEKATYLKNWFGEERWKLLCQEITEKALKK
TSTSDKLKTTSSKALLSAEEYFTINKARLIARSQSGIDSNLAIDSDICKLYSLHSLVSQV
LKNPNISVDAIGVYVLSEKFFWKKI
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
gtggaacccatcccaggaaaaaaagttctaattaaagggcaagaaaaacttggttttgga
aatatttattgttacccaggtgtggatggaatagtagaggtacatttctttattagtcca
actcattttgaatctatacaaattcacaaatcacagctaatttaccagatgatcccccgc
caaacatgctgctttcaaacaaatgaaaatgtgtcatacggacgcattttattatgtagt
aatgaagataaaaactttagaagttaccagatcacatttgataatcaaaaagccccaatc
gaatttcgcgaagatgattttcaagtccgatcttgctggccatctagtccagaaaaaatg
ttagaagaacttgttcaaggaacacctttttttttccatcaaagatataaacttttagaa
caactgatataccatcgtcaactgtgtgaaggaattactagcttcacatccagcaaagtg
gaattattttctcatcagatagaaatagcatctcgtatcttacgagatcctaatatacgc
tatctacttgctgatgaagtcggtttaggaaaaacaatcgaaacagggataattttaaaa
caagtgcttctggattctccacaaacgatgataaagatttatgttcccacagcattggtt
tggcaatggaaagaggaattaaaaagacgtttttctattacaaatatatcagttgttgaa
cacaatgatttattaactaactctaacagccagttagatttagttgtagtagatgaagcg
caccgaatagttaccgctaaaaagtctagttcggagaaagcgcctctgtatgaagcattt
tgtaaactagctaagaaaacaaggcatattttattactttctgctactccagttttgcac
tgcgaatcgcaacttttagctctacttcatttactcactccagaaacatatcaattggaa
cacattgaggtatttagagaacgccttgcaaaacgacaggaaataggacgtgtacttcta
gctttatctaaagcaaaaaaccctcttttacttaaaaggcatgcgaagaagttgtctgtg
attttgccaagagataagaccatttctagtttagtaaatcaagtatacgaagctaaaaaa
gatgacatcataaaagtagtaaaatctttacaaatccacataagcgaaacttatcgtatt
catcgtcggatgttaagaacacgtcgagcatggatgacagaagatcacggtttatgttcg
cgtaaagtagcattaagttatgagtttgaacttaacgatgaacttcttgaatttctttgg
gaaaatcttgaaaattggcgtatagaagtagcaagtaacattagtcaacaaatcgattta
caaaaaaacatagatctttattttgaaatctcagagattatagctagcgatacaatgtta
ctgtctaaaaaaatcaagaaactattagtcgataatccaaagcaagaaggggcatatatt
ctacaaaaaatgtgtgatgccgttgaaaaaaaatggcctgaagatagaatctttctaata
caagaaattctcaaacaacttaattctaagaaaactttacaaaaatatgtagtgttttgt
tcgactgtagaattgtgcaataaaattgaggaacgtttgaaaaaaactttcaaaaatcat
ttgtatgtactccatgaacaaatgtcggcggagtacagtcaaaaaatcattcaaggcttt
aaaaagagcaaccgaaatagctttctgattgtagattcctcattagaagagggagtaaat
ttacattttgctactggtataattctatttgatatcccttggtcaccgatgcgtatagag
caacgtttaggacgtttagaccgtatcagtcgtacagaaaacataccgtgtaaagttatt
gttactctagacaatgaagaacttgctgtcgatgatgcttggcgtagactactagttgag
gggtacggaatttttaacgactctgtttctgatatacagtttttaatagacgaacagatg
ccctatttaaaacagcgtacttttgaaggtggtcccagtgcattagtctctgcaataggt
gagcttaaatctaaaatcgaggaagaacgactgcgaatagtagagcaagatgttgttgat
ggaatgtatacgttacgcaaggtaaacgaaatgtttaaaaacttagacatgggggataac
gaagaggttaaaaacaaaactttatcaaaagcattaattagttacttaaaagataatgtt
ggtttgcggcctattaaagtaaatcgtgacacatttaagtttacattgcctaaacgtaaa
gaacctctaatcccattcaattatctagatgaaatgcaaagtttgtttcaagaaggaacc
tctattcgaaatgttgcaactataagaaattcagggcttcaattttttcgacctggacat
agaggtctcgatatatgtcatgaacttctaaagaaagatgatcgagggcgttgctttgta
ttatggcgcaagtgttatggaagaatagatccttgtattattttcagaataatccttaat
gtatatccaaacttagatccaataattaaatttttaaatgaacatgattgggatgatatt
gctcgcggcggattattacgaatgataaaggggtggtttaacgaatatctttatgaatta
ttcttagacgtagagggagaaattgcgaaattggatttaatcgaaatttgtaaaaaacct
tacaaagctccccctgatataaacatgggaaaagaaaaagctacatatcttaaaaactgg
tttggggaagaaagatggaagttattatgccaggaaattacggaaaaagctcttaaaaaa
acttccactagtgataaattaaaaacaactagtagcaaagctttgctttcagccgaagaa
tactttaccatcaacaaggcacgtctaattgcacgatctcaaagtggtatagatagtaat
ttagccatcgactctgatatatgtaaactttattcattgcatagtttagtatctcaagta
ttaaaaaatccaaatatatcagttgatgcaatcggggtatatgttttatctgaaaagttt
ttttggaaaaaaatatag
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