Ursus americanus (American black bear): 123775408
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Entry
123775408 CDS
T07931
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03030
DNA replication
uar03410
Base excision repair
uar03420
Nucleotide excision repair
uar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123775408 (RFC1)
03410 Base excision repair
123775408 (RFC1)
03420 Nucleotide excision repair
123775408 (RFC1)
03430 Mismatch repair
123775408 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uar03032
]
123775408 (RFC1)
03400 DNA repair and recombination proteins [BR:
uar03400
]
123775408 (RFC1)
DNA replication proteins [BR:
uar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123775408 (RFC1)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123775408 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
Rad17
RuvB_N
AAA_17
AAA_14
AAA_30
AAA_5
SKI
AAA_33
AAA_18
AAA_16
Zeta_toxin
AAA_7
nSTAND3
AAA_19
RNA_helicase
NTPase_1
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
123775408
NCBI-ProteinID:
XP_045626493
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETIKKSEKTKSAEETLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLPLSSKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKQPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ARKDPGEREAFSSVQANLSKAEKHTSPHKVKTEQFSDDRKNCSPKKQTKCESLIGSQQHL
KSSPHKIGETSPKASSKVALLKKKGESSYKETEPMASKRKENAVELKGQTKTPKKPKSSP
AKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRT
MPGKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESGSKKSRLTPKKDSSTK
PVKKETSVLWRCLDFEEQVAEETNGDSRARSLADDSPENKVEDLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLRNWHKGPSEDQKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSITGFYSTSQHGSGGAAHSVSMK
HALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQR
PRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLRMWCARSKALTYDQAK
ADSHRAKKDIKLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKP
IAAGGDMKKHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYASVLPGELMRGYMT
QFPTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNVDYLSHIRDALVQPLTSQG
VEGVQDVIALMDSYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEVHLTP
YSLQAVKTPRHSTGPALDSEYSEDLNEDDSQSEEKDQDSVETDAMIKKKTKSSKPSKSEK
DKESRKGKGKSSKK
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacccgtaactgaaaca
ataaagaagagtgagaaaacaaagtccgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaattgccattgtcttctaaacctggtaaaattctgcgc
caggatcctgttacgtacatttcagaaacagatgaagaagatgactttatgtgtaagaag
gcagcctctaaatcaaaagagaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaacgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgattattttggaactggaagtgtccaaagatcagataagaag
atggtagcaagcaaaagaaagcagccttcacaaaatgcagacgattccagattaaatgat
gaagccatcgccaagcagttgcaacttgacgaggatgcagagctggagagacaactgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctcggaaggacccaggagagagagaagcattttcatctgtccaagccaatttaagtaaa
gcagaaaaacatacatctcctcataaagtaaaaacagaacaattttcagatgacagaaag
aactgcagccccaagaagcaaactaaatgtgaaagtttgataggatctcagcaacatttg
aagtcatcccctcacaaaataggagaaacttctccaaaagccagttccaaggtggccctt
ttgaaaaaaaagggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaa
gaaaatgctgttgaattaaaaggacagacaaaaactcccaagaaacccaaaagttctcca
gctaaaaaagagtctgtaagtcctgaagattctgagaagagacgcaccaattatcaagct
tatcgaagctacttaaatcgagaaggccccaaagctctgggctccaaagaaataccaaag
ggagctgaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatt
gaacgagatgaggccaagtctctaattgagcgttacgggggaaaagtaacaggaaatgtc
agcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataag
gcagcagccttggggacaaatattattgatgaagatggcctgttgaatctgattcgaact
atgccaggcaagaagtctaagtatgaaatagctgttgaagccgagatgaagaaagaaaag
tccaaattagaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaact
aagaaggaatcaggatctaaaaaaagcagactgactcccaaaaaggacagctctacaaag
ccagtgaaaaaggaaacaagtgtgctttggagatgcctggacttcgaggagcaggtggcc
gaggagacaaacggtgacagccgggctaggagtttggctgatgacagccctgaaaacaaa
gtggaagatttgctctgggtggataaatataagccaacctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctgcgctggctccggaactggcacaag
ggtccgtcggaagatcagaaacgcgcagcaaagtttggtaagtttgctggcaaagatgat
ggctctagttttaaagcagcgctgctctcaggcccgccaggtgttggcaagacaaccaca
gcttctctggtttgtcaggaattggggtatagctatgtggaactgaatgcaagtgacact
cggagtaagaacagtttgaaggagattgttgctgaatcactgaataataccagcatcaca
ggcttttattcaacttctcagcatgggtcaggcggagcagcccattcagtaagcatgaaa
catgctctcatcatggatgaagtagatggcatggcaggcaatgaggacaggggaggaatt
caggaattaattggtctgataaaacatacaaaaattcccattatttgtatgtgcaatgat
agaaatcatcccaagattcgctctttggttcattattgttttgatcttcgttttcaaaga
cctcgagttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttgaag
atcccccctccagctatgaatgaaataattttgggagccaatcaagatatcagacaggtt
ttacacaatctgaggatgtggtgtgcacgaagtaaggcgctaacctatgaccaggccaag
gctgattctcacagagccaagaaagatatcaaactgggcccatttgacgttgcccggaaa
gtgtttgcggctggagaggagaccgctcatatgtcacttgtggacaagtcagatctcttc
tttcatgattattcgatagcacccctctttgtccaggagaactacatacatgtgaagcct
atagctgcagggggtgacatgaaaaagcacttgatgcttttaagcagagcagcagatagc
atatgtgatggtgacctggtggaccgtcagatccggagtaggcagaactggagtcttctg
cccacacaggccatttatgccagtgttcttcctggagagttaatgagggggtacatgacc
cagtttcctacctttccaagctggttggggaagcactcatctaccggcaaacatgatcgt
attgtacaggacctcgcactgcacatgagtctcagaacttattccagcaaaaggactgta
aacgtggattatctgtcacatataagggatgcgcttgtacagcccttgacctcacagggg
gtagaaggggtacaggatgttattgctcttatggactcctactacttgatgaaagaagac
ttcgagaatatcatggaaattagcagctggggaggcaaacctagtcccttctccaagctg
gaccccaaggtgaaggcagccttcacgagaacttacaataaggaagtccaccttactccg
tactcacttcaggcggtgaagacacccagacacagcacaggcccagcactggattctgaa
tacagtgaagacttaaatgaagacgactctcagtctgaggagaaagaccaggactctgtg
gaaacggatgcaatgatcaagaaaaagacaaaatcttcaaagccttcaaaatcagaaaaa
gataaggagtccagaaaaggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
