Ursus americanus (American black bear): 123775438
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Entry
123775438 CDS
T07931
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04014
Ras signaling pathway
uar04015
Rap1 signaling pathway
uar04024
cAMP signaling pathway
uar04517
IgSF CAM signaling
uar04519
Cadherin signaling
uar04520
Adherens junction
uar04530
Tight junction
uar04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
123775438 (AFDN)
04015 Rap1 signaling pathway
123775438 (AFDN)
04024 cAMP signaling pathway
123775438 (AFDN)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123775438 (AFDN)
04519 Cadherin signaling
123775438 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
123775438 (AFDN)
04530 Tight junction
123775438 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
123775438 (AFDN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
123775438
NCBI-ProteinID:
XP_045626544
LinkDB
All DBs
Position
Unknown
AA seq
1960 aa
AA seq
DB search
MPRCVRCSYICIVLSSSLFVFCFFFPFLVLFAVAEHLPCSSQDRNLDLSACLHTVDVISG
REEVSNNVLRFDSDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPD
MRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNKDDREGRFVLKNENDALPPKKAQ
SNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAVRQASDKDDRPFQGDDIENSRLAAE
VYKDMPETSFTRTISNPEVVMKRRRQQKLERRMQEFRSSDGRPDSGGTLRIYADSLKPNI
PYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIARVMLPPGAQHSDEKGAKEIILDD
DECPLQIFREWPSDKGVLVFQLKRRPPDYVPKKTKKHVDGKLVKGKERAEGSGYGSALPP
EKLPYLVELSPGRRNHFAYYNYHAYEDGSDSRDKPKLYRLQLSVTEVGTEKFDENSIQLF
GSGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISETTMLQSGMKVQFGASHVFKFVD
PSQDHALAKRSVDGGLTAKGPRHKPGIVQETTFDLGGDVHSGTALPTSKSTTRLDSDKVL
SASSTAERGMVKPMIRVEQQQDYRRQENRTQDASGPELILPASIEFRESSEDSFLSAIIN
YTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIALVNKMVSMMEGVIQEV
DQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCL
QSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFV
NMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLT
MDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPTDLIENVVAVAENTADELA
RSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRLVPHARSP
GTWTIYFEGADYESHLLRESTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLG
IYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGA
IYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAPNGSPESPQLPWAEYSEP
KKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAYAPGTTAKITSVSTGNLCTEEQTPPP
RPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPNYEEKPHMHPDSNHSSIAIQRVTR
SQEELREDKAYQLERHRIEAVLDRKSDSDMWIHQSSSVGSSTSSQEHLDHSSKSGTPAST
LTKSGPGRWKTPAAVQPMPAAVSQPVQTDLPPPPPPPPTHYAGDFDGIPMDLPLPPPPAG
QTGPASAQVAATERRKREEHQRWYEKEKARLEEERDRKRREQERKLGQMRSQSLNPAPFS
PVTVPHVKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSKEELSSGDSLSPDP
WKRDAREKLEKQQQMHIVDMLSREIHELQNKPERSAEENDRLRKLMLEWQFQKRLQESKQ
KDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKRE
AEDRARQEEERRRQEEERTKRDAEEKRRQEEGYYSRLEAERRRQHAEAERRLLEPEEPGL
CRPPLPRGYELPSPSPPAAAPPPPPQRTASSLQAQALSPDSVYTARLVAYHEEEEAEEHC
GLAGQDKHSCTRKSLGHLLLPAALKPQQPPCPPRPASDGIFLSNAFQPPSARANSTAHKA
GQPPPPPKEPGFCQPSHSKGRGPNSYMGSAGTAVGAHDAYRDPRERLSKSHDADLPGSPG
APENLTFRERQRLFSQGQDVSNKVKASRKLTELENELNTK
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatgtgttagatgttcttatatttgtattgtattatcatcatcattatttgtg
ttttgttttttctttccctttcttgttttgtttgctgtagcagaacatcttccttgttca
tctcaggacagaaatttagatctgtctgcttgtcttcacacagttgatgttatttctggg
agagaggaggtttccaacaacgtgctgaggtttgatagtgatttggagttccatggagtg
atgagattttattttcaagataaagctgctggaaattttgcaacaaaatgtattcgggta
tctagtactgccaccactcaagatgtgatcgagacactggcagagaaattccggcctgac
atgcggatgctgtcatcccccaagtactccctctatgaagtgcatgtcagcggagaagaa
agaagattggatatagatgagaagcccctagttgttcagttgaattggaataaagacgat
cgagagggcagatttgttcttaagaatgagaacgatgccctccctcctaagaaggctcaa
agcaatggacctgagaagcaggagaaagaaggtgttatccagaacttcaagagaaccctc
tcaaagaaagaaaagaaggagaaaaagaagagagaaaaagaggcagtaaggcaggcgtct
gataaggatgataggcctttccaaggggatgacattgagaattcccgactggctgcagag
gtttacaaagacatgcctgaaactagctttacccgaacaatttcgaatccggaggtggtc
atgaagcgtcgccggcagcagaaactagagaggaggatgcaggagttccggagctcggat
gggcggcccgactcaggtggaacattgagaatttatgcagatagtttaaaaccaaatatt
ccgtacaagacaatcctgctgtctaccacagatcctgcagacttcgctgtggctgaagct
ttagagaaatatggcctggagaaggaaaatcccaaggattactgcattgcccgggttatg
cttcctcctggagcccagcattctgacgaaaaaggtgctaaagaaattatccttgatgat
gatgagtgtcctttacaaatcttcagggaatggccaagtgacaaaggggttttagtcttt
cagttgaagaggagaccaccagactatgtcccaaagaaaactaagaaacacgtcgatggg
aagctggtgaagggcaaggagagagcagaggggtcgggctatggctccgcacttccgccc
gaaaagctgccctatctagtagagttgagcccagggagaaggaatcactttgcctactac
aactatcacgcttacgaagacggctctgactccagagataagcccaagctttaccgcctt
cagttgagcgtcactgaggttgggacagaaaagttcgatgagaactccatccagctgttt
ggatcaggaattcagccccatcactgtgacctcacaaacatggatggggttgtcaccgtc
acgccaagaagcatggatgctgagacttatgtggaaggacagcgcatctcagagacaacc
atgctgcaaagtggaatgaaagtgcagttcggggcatcacacgtgttcaagtttgtggac
cccagccaggaccacgctctggcaaagagatctgtggatggaggcctgacagccaagggt
cccagacataagcctggaatcgttcaagagacaacttttgatttaggaggagatgttcat
agtggaacagcactgccaacaagcaagagcaccacgaggctggacagcgacaaggtgttg
tctgcctccagcacggcggagcgagggatggtgaagccaatgatcagagtagaacagcag
caggattaccgcaggcaagaaaacagaactcaggatgcctctgggcctgaactgatactg
cctgcaagcattgaattcagggaaagttctgaagattcatttttatctgccattataaat
tatactaatagctctaccgtccattttaagttgtcacctacatatgtattatatatggca
tgtcggtatgtattgtccagccagtacagacctgatgtcagtcctacagagcgtactcac
aaagtgattgcactagtcaacaagatggtgagcatgatggagggggtgattcaggaagta
gaccaggttgatcagaaacagaagaatattgcaggggcacttgccttctggatggccaat
gcatctgagctcctcaacttcattaaacaggaccgagatcttagtcgaatcacattggat
gcccaagacgttttagcacacttggttcaaatggcatttaaatatctggttcattgtctt
caatcagaactgaataattacatgccagcctttctggatgaccctgaagagaacagtcta
caaagaccaaaaatagatgatgttttgcacacgctcacgggagccatgtctttgctgcgg
cgctgcagagtcaacgccgccctgaccatccagctcttctcccagctcttccacttcgtc
aacatgtggctcttcaacaggctggtgaccgaccccgagtcaggactgtgctctcactac
tggggggcgatcatccgccagcagctgggacacgtggaagcctgggcagaaaagcagggc
ttggagctggccgccgactgtcacctcagccggatagtgcaggcaaccactttgcttaca
atggataaatacgcacctgatgacattccgaatataaacagtacctgctttaagttaaac
tcactgcaactgcaagccttgttacagaattaccactgtgcacccgatgagccttttatc
cccacggacctgatagaaaacgtggtggctgtggctgaaaacacggctgacgagctggcg
cgcagtgacgggagggaggtgcagctcgaagaggaccccgatctgcagctgccttttctt
ttgccagaagatggctattcttgtgatgttgtcaggaacattccaaatggtttacaagaa
tttttggaccctttgtgccagagaggattttgcaggctagtccctcatgcacgctcacca
ggtacttggacgatatattttgaaggtgcagattatgagagccaccttctgcgtgagagc
acggagctggctcagcctctgaggaaagaacctgaaataatcactgtgactcttaaaaag
caaaatgggatgggcctcagcattgttgcagcaaagggtgctggtcaagataaacttgga
atctatgtcaagtctgttgtaaaaggaggtgctgcggatgtggatggacgcctggctgca
ggtgaccagctcctcagtgtggatggacgaagtctggtaggactctctcaagaaagggcg
gcagaactcatgacaagaacaagttctgtggtaacactagaagtagcaaagcagggagca
atttatcacggcctcgccaccctgctcaatcagccgtccccgatgatgcaaagaatttca
gaccgtcgtggctcaggtaaaccccgaccaaagagtgaaggtttcgagctctataataat
tcagctccaaacgggtcacctgagagccctcagctgccctgggcagaatacagtgaaccg
aagaaattgccgggcgacgacaggctgatgaagaaccgggctgatcaccgctctagcccc
aacgtggcaaatcagcctcctagccctggagggaagagcgcgtacgcccccggaacaaca
gctaagataacgtctgtctccactgggaacctctgcactgaggaacagacccctccacct
agacctgaggcctaccccatccccactcagacgtacaccagagagtatttcaccttccca
gcttccaaatcccaggaccggatggctcctcctcagaaccagtggccaaattatgaggag
aagccacacatgcacccagacagtaatcattccagtattgcaattcagcgtgttacccgt
tcccaagaggaacttcgggaggataaagcataccagctagagaggcatcgaatcgaggca
gtcttggatcgcaagtctgatagtgatatgtggatccatcagagctcctcggtgggctcc
agcacctccagccaagagcacctggaccactcctccaagtcaggcactcccgcatccact
ctgaccaagagtggccctgggcgctggaagacgccagccgctgtgcagcccatgcccgcg
gccgtctcccagcctgtccaaacagacctgcccccgccgccgccgccacctcccacccac
tatgccggagactttgacggaatccccatggacttgcctctccctccgcctcctgccggc
cagacaggacctgcgtctgctcaggtggcggccacagagcggcggaagcgggaagagcac
cagcggtggtatgagaaggagaaggcccgtctagaagaggagcgggacaggaagcgcagg
gagcaggagcggaagctgggccagatgcgctcccagtccctgaacccggccccgttctct
cctgtgaccgtcccacacgtgaagccagaaaaaccgtccacactgcagaggccccaggag
acggtcattcgggagctgcagccccagcagcagccccgcacgattgagcgcagagactta
cagtacattacggtcagcaaagaggagctgtcgtcgggagacagtctgtccccagacccg
tggaagcgggatgccagggagaagctggagaagcagcagcagatgcacatcgtggatatg
ctgagcagggagatccacgagctccagaacaagcccgagcgcagtgcggaggagaacgac
cgcctgcggaagctcatgctggagtggcagttccagaagagactccaggagtccaaacag
aaggacgaggatgatgaggaagaggaggacgatgacgtggataccatgctgatcatgcag
cgccttgaggctgagcggagagcaaggcagactgctctgccagcaatctctgttctagat
ttgttacaggatgaggagcggaggcgccagcagcagctggaagagatgcgcaagcgggag
gccgaagatcgcgccaggcaggaggaggagcggcgccgccaggaggaggagagaacaaag
cgagatgctgaagaaaagaggcgacaagaagaagggtattacagccgcctggaagctgag
aggcgcagacagcacgcggaggccgagcgcaggttgctggagccggaggagccgggtctg
tgcagacctccgcttccgcggggctacgagctcccgtccccgtcccctccggctgccgct
cctcctcccccgcctcagcggaccgcctcctccctccaggcgcaggccctctccccagac
tccgtgtacaccgccaggctcgttgcgtaccacgaggaggaggaggcggaggagcactgc
ggcctggcaggtcaggataagcactcttgcacgaggaagtccctcgggcaccttcttctt
cccgccgcccttaagccgcagcagcccccctgcccgccgcgcccggcctccgatggcatc
tttctctccaacgcattccagcccccctcggcccgtgccaacagtactgctcacaaagca
ggccagcccccgccccctccaaaagaaccaggcttctgccagcccagccactcgaaaggt
agaggaccaaactcttacatgggatcggctgggacagctgttggtgcccatgatgcttat
cgggatccgagagagagactgtctaaaagccacgatgcagatttacctgggagtccggga
gcccctgagaacttgacgttcagagagcgccagcgcctgttttcacaaggtcaagatgtg
tccaacaaagtaaaagcctctcgtaaattaacagaactggaaaacgaactgaacacaaaa
tga
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integrated database retrieval system