Ursus americanus (American black bear): 123775832
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Entry
123775832 CDS
T07931
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04140
Autophagy - animal
uar04148
Efferocytosis
uar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123775832 (VPS39)
04148 Efferocytosis
123775832 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
123775832 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123775832 (VPS39)
Membrane trafficking [BR:
uar04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
123775832 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Lgl_C
SAM_CEP-1_C
DUF4145
Motif
Other DBs
NCBI-GeneID:
123775832
NCBI-ProteinID:
XP_045627365
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCKNSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEHVIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRRKLLIFLEIS
GYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKHYDQNR
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccagtgccgatcctagaaaagctgcctctgcagatcgactgt
ttggctgcttgggaggaatggctgcttgttggcaccaaacaaggacatcttcttctctat
aggatccggaaggatgctggttgcaacaggtttgaagtgacactagagaaatccaataaa
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttacgtccatgacctgttgacatttcaacaaatcactacggtt
tcaaaggcaaagggagcctcactgtttacatgtgacctccagcacacagagactggtgag
gaggtgctgcggatgtgcgtggctgtgaaaaagaagctgcagctctacttctggaaggac
agggaatttcatgaattgcagggagactttagtgtaccagatgtgcccaagtccatggca
tggtgcaaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaagggtccatcaaagagctctttccaacaggaaaacagctggagccgttagttgca
cctctggcagatggaaaagtggctgtgggtcaggatgatctcaccgtggtgctcaatgag
gaggggatctgcacacagaaatgtgccttgaactggacagacataccagtggccatggag
caccagcctccctacatcattgcagttctgcctcgatatgtggagatccgaacatttgaa
ccaaggcttctggtccagagcattgaactgcaaaggccccgcttcattacctcaggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcattcctgtccccatg
gcaacacaaatccaacagcttctccaggacaagcagtttgaattggctctacagctcgca
gaaatgaaagatgattccgacagcgaaaagcagcaacagatccatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag
cttggcacagatcctacccatgtgatgggcctgtacccggacctgctgcccacagactac
aggaagcagctgcagtatcctaacccgctgcctgtgctctcaggggctgaactggagaag
gcacacttagctctgattgactacctgacacagaaacgaagccagttggtaaagaagctg
aatgactctgatcaccagtctagcacctccccgcttatggaaggcactcccaccatcaaa
tccaagaagaagctgttgcagatcattgacaccacgctgctcaagtgctacctccatacg
aacgtggccctggtggcccctctgctgcgcctggagaacaaccactgccacatcgaggag
agcgagcatgtactgaagaaggcgcacaagtacagtgagctgatcatcctgtatgagaag
aaggggctccacgagaaagctctgcaggtgctggtggaccagtccaagaaagcaaattcg
cctctgaaaggccacgagaggacagtgcagtatctgcagcatttgggcacagaaaacctg
catttgattttttcctactcggtgtgggtgctgcgagacttcccagaggatggcctaaag
atctttaccgaagacctcccggaggtggaatctctgccacgggaccgagtgctcggcttc
ttagtggagaattttaagggcctggctattccttatctggaacatgtcatccacgtttgg
gaggaaacgggctctcggttccacaactgcctgatccagctgtactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccctgcaggcaaaactccagtccctgctgga
gaggaagagggtgagctgggagaataccgacggaagctccttatattcttggaaatttct
ggctactatgatccaggccggcttatctgtgactttccttttgatggcctcttagaagag
cgtgcactgctgctgggccgcatgggaaagcacgagcaagcgctcttcatctacgtgcac
atcctgaaggacaccaagatggccgaggagtactgccacaagcattatgaccaaaacaga
gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcgccccccagtgtt
cactgcctgggaccaatcaagctggaactgctggagccacaagccaacctccaggctgcc
ctgcaggtcctcgagctgcaccacagcaagctggacaccaccaaggccatcaaccttcta
ccagcaaacactcagattaacgatatacgcatctttctggaaaaggtcttggaagaaaat
gcacaaaaaaaacggttcaatcaagtgctcaagaaccttctccatgcagaatttctgaga
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcacggaggagaaggtc
tgcatggtgtgtaagaagaagattggaaacagtgcatttgcaagataccccaatggagtg
gtcgtgcactacttctgttccaaagaggtaaacccagctgacacctga
DBGET
integrated database retrieval system
