Ursus americanus (American black bear): 123776116
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Entry
123776116 CDS
T07931
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03015
mRNA surveillance pathway
uar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123776116 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
123776116 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123776116 (PABPC4)
03041 Spliceosome [BR:
uar03041
]
123776116 (PABPC4)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123776116 (PABPC4)
mRNA cycle factors
Stress granule specific factors
123776116 (PABPC4)
Spliceosome [BR:
uar03041
]
Complex C
Other components
Complex C specific factors
123776116 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
123776116
NCBI-ProteinID:
XP_045627871
UniProt:
A0A452Q8I4
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDGCQSGGVPTAVQTLAPRATVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatgtgattaagggaaag
ccaatccgtatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaatctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctgtcttgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgagacgcaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gctgagcttggagccaaagccaaggagttcactaatgtctatatcaaaaacttcggggaa
gaggtggatgatgagagcctgaaagagctgtttagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgagaaa
cacgaggatgccaataaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtg
atttttgtaggccgtgcacagaagaaagtggaacggcaggctgagttaaagcggaaattt
gaacagctgaaacaagagagaattagtcggtatcagggggtgaatctgtacattaagaac
ttggatgacaccattgatgatgagaagttaaggaaagagttttctccttttggctcaatc
accagtgctaaggtaatgttggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcagtcactgagatgaacggacgcatcgtgggctcc
aaaccactctatgtcgccctggcccagaggaaggaggagagaaaggctcacctgaccaac
cagtatatgcagcgggtggccggaatgcgagcgctgcctgccaacgccatcttaaatcag
ttccagcctgcagctggaggttactttgtgccagcggttccgcaggctcagggaagacct
ccatattacacacccaaccagttagcacagatgaggcctaacccccgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccgagtgctatacgccagtctgggcctcgtccc
gctcttcgccatctggctccaactggtaatgctccggcctctcgcggcctccctactacc
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggc
gccgcccagcaagggctgactgacggctgccagtctggaggtgttcccacagctgtgcag
accttagcgcctcgtgccactgtcgctgccgctgcccctcgggctgtcgcaccttacaaa
tacgcctccagtgtccgcagccctcaccctgccatccagcctctgcaggcaccgcagcct
gccgtccacgtgcaggggcaggagcccctgaccgcctccatgctggctgcagcgcctccc
caggagcagaagcagatgctgggagaacgtttgttcccactcatccaaaccatgcattca
aacctggcggggaaaatcacgggcatgctgctggagattgacaactctgagctgctgcac
atgctggagtcccccgagtctctccgctccaaggtggacgaagctgtggcggttctgcag
gctcatcacgccaagaaagaagccgcccagaaggtgggcgctgttgctgctgctacctct
tag
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