Ursus americanus (American black bear): 123776900
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Entry
123776900 CDS
T07931
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03030
DNA replication
uar03420
Nucleotide excision repair
uar03430
Mismatch repair
uar03440
Homologous recombination
uar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123776900 (RPA1)
03420 Nucleotide excision repair
123776900 (RPA1)
03430 Mismatch repair
123776900 (RPA1)
03440 Homologous recombination
123776900 (RPA1)
03460 Fanconi anemia pathway
123776900 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uar03000
]
123776900 (RPA1)
03032 DNA replication proteins [BR:
uar03032
]
123776900 (RPA1)
03400 DNA repair and recombination proteins [BR:
uar03400
]
123776900 (RPA1)
Transcription factors [BR:
uar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123776900 (RPA1)
DNA replication proteins [BR:
uar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123776900 (RPA1)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123776900 (RPA1)
MMR (mismatch excision repair)
123776900 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
123776900 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
A_deaminase
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-GeneID:
123776900
NCBI-ProteinID:
XP_045629215
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MVGRLSEGAIAAIMQQGDTSIKPILQVINIRPIITGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRHRTHGKQIQQAFSSSYGRVVILMELDILR
SAEAVGLKIGNPVPYNEGHGQQQVVPSPVSAASAPASKPQQQNGSSAMGSTTSKTYGASK
TFGKAGGTSLTNSAGGTQVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFS
IELVDESGEIRATAFNEQVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNE
TSVMPCEDGHHLPTVQFDFTGIGDLESKPKDSLIDIIGICKSYEDATKITVKSNNREVSK
RNIYLMDMSGKVVTATLWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNP
DIPEAYKLRGWFDSEGQALDGVSISDLKSGGTGGSNTNWKTLYEVKSENLGHGDKADYFS
SVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADF
QENQWVTCFQESAEAIVGQSTSYLGELKEKNEQAFEEIFQNANFRSFTFRIRVKLETYND
ESRIKATVMDVKPVDYREYGRRLIMNIRRNALM
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccgcctgagcgagggggccattgcggccataatgcaacagggagatacatcc
ataaaacccattctccaagtcattaacatccgtcccattatcacagggaatagtccgccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgttgaggaagaacaattgtctagcaactgtatttgccagattaac
cgattcattgttaacactctgaaagatggacgtcacagaacacatgggaaacaaatacag
caagcgttctcatcttcatacgggagagtagttattttgatggagctagacattttgaga
tcagctgaagcagttggattaaagattggcaatcccgtgccctataatgaaggacatggg
cagcagcaggtagttccttcccccgtctcagcggccagtgcgccagccagcaagccccag
cagcagaatgggagctcagcaatgggttccactacatctaagacttatggtgcctcaaag
acatttggaaaagctggaggtaccagcctcacgaacagtgctggaggaacacaggtcaaa
gtggtacccattgccagcctcaccccttaccaatccaagtggactatctgtgctcgagtt
accaataaaagtcagatccgtacctggagcaattcccgaggggaagggaagcttttctcc
atagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgagcaagtggac
aagttctttccccttatcgacatgaacaaggtctattatatctctaaaggcatcctgaag
attgctaacaaacagttcacagctgttaaaaatgactatgagatgaccttcaataatgag
acttctgtcatgccctgtgaagatggtcatcatttacctacagttcagtttgatttcaca
gggattggtgacctggagagcaagcctaaagactcacttatagacataattgggatctgc
aagagctacgaagatgccaccaaaatcacagtgaagtctaacaacagagaagtttctaag
agaaatatctatttgatggacatgtcagggaaagtggtgaccgctactctgtggggagaa
gatgctgatagatttgatggttctagacaacccgtgatggctatcaaaggagccagagtt
tctgattttggtggacggagcctctctgtactgtcttcaagcacggtcattgtgaatcct
gacatcccagaggcctataagcttcgtggatggtttgactcggaaggacaagccttagat
ggtgtttccatctctgatctaaagagtggaggaacaggagggagcaacaccaactggaaa
actttatatgaggttaaatccgagaacctgggccatggtgacaaggccgactattttagc
tctgtggcgacagtagtctatcttcgcaaagagaactgtatgtatcaggcctgcccaact
caggactgcaataagaaagtgattgaccaacagaatggattataccgctgtgagaagtgc
gacagtgaatttcccaacttcaagtaccgcatgatcctgtcagtaaatattgctgatttt
caagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcgttggacaaagc
acttcttatcttggggagttaaaagagaagaatgagcaagcatttgaggaaattttccag
aatgccaacttccgatctttcacattcaggatcagggtgaaactagagacctacaatgac
gagtctcgaattaaggccactgtgatggacgtgaagcccgtggactacagagaatatggc
agaaggctgatcatgaacatcaggagaaacgcgctgatgtga
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integrated database retrieval system
