Ursus americanus (American black bear): 123778094
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Entry
123778094 CDS
T07931
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04151
PI3K-Akt signaling pathway
uar04510
Focal adhesion
uar04512
ECM-receptor interaction
uar04820
Cytoskeleton in muscle cells
uar04926
Relaxin signaling pathway
uar04933
AGE-RAGE signaling pathway in diabetic complications
uar04974
Protein digestion and absorption
uar05146
Amoebiasis
uar05165
Human papillomavirus infection
uar05200
Pathways in cancer
uar05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123778094 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123778094 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123778094 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123778094 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123778094 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
123778094 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123778094 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
123778094 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123778094 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
123778094 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123778094 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uar04147
]
123778094 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
uar00536
]
123778094 (COL4A3)
Exosome [BR:
uar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123778094 (COL4A3)
Glycosaminoglycan binding proteins [BR:
uar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123778094 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123778094
NCBI-ProteinID:
XP_045631233
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MSPRTAPRPPALLLQLLLVLLAAAPTTGKGCVCKDKGQCFCDGIKGEKGEKGFPGPVGSP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGSKGEQGFPGLPGIPGYPGILGAVGLKGEKGAPAAKGIEPDGRGDPGLPGAPGF
QGLPGLPGFPGPVGPPGPPGFLGFPGTMGPPGPKGHMGDNVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTDLKGEKGDQGAVGKSGPPGPSGPPGESYGSQKGAPGEPGPQGKPGK
DGAPGFPGTEGAKGNRGFPGLRGEDGIKGWKGDIGPPGFRGPTEYYDAYQEKGDEGLPGP
PGPKGARGPQGPSGSPGVPGSAGSSRPGLRGAPGPPGVKGSKGEQGPPGKNAVGPPGSPG
CPGSPGPIGLPGYPGPPGGIVFRQGPPGDGGLPGLVGFPGIPGVDGPKGEPGLLCIQCPC
IPGPPGLPGLPGLDGIKGIPGGQGAAGVKGSPGYPGSVGLPGFPGFPGTPGGPGLKGEKG
EAPQPEGEVGAPGDPGLRGHPGRRGLDGIPGTPGIKGSPGPKGEPALSGEKGDQGPPGDL
GTPGSPGPAGPPGPPNYGPQGEPGPKGTQGVPGAPGPPGEAGPKGEFGISTPVPGPPGPP
GPSGHAGPQGPPGVPGSIGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGEQGFPGAKGAPG
CPGEMGKPGSPGEPGLPGAKGEPGLAMPGEPGTPGFPGERGNSGENGEIGLPGPPGLPGI
PGTGGVDGLQGDPGKPGPPGEKGSPGRCMVGPRGAQGLPGLNGLEGQQGRRGETGPKGDP
GIPGLDRSGFPGEAGPPGMPGHRGEMGQPGQKGYPGNPGFLGLSGEKGMMGMMGHPGNTG
PPGPPGNPGTPGQRGSFGIPGAKGEKGPPGAKGEKGDKGPRGPSQISNLLGDKGEPGLKG
FAGKPGEKGNRGIPGLPGFKGHEGPPGPPGPPGLRGDPGSIGNPGEPGPRGGPGSMGNMG
VPGPKGHRGTLGLPGLTGRPGLPGVHGLRGDKGEPGYSAGTWRGPPGPKGDPGLPGDMGR
KGERGLPGTPGHSGPAGTEGAPGIPGSPGHPGKPGPDGDLGLKGIKGLPGSPGVKGPPGP
PGFLGPPGPVGMRGSQGRDGIPGPAGEKGETGLLGAHPGPRGSPGAPGAKGDRGVPGLPG
LPGRKGAVGDAGPRGPTGVMGLPGPPGFPGAIIPGQKGNRGPPGFRGNPGEPGPLGPPGS
HVRGIKGDKGLLGEPGPRGLPGTVGAEGPPGPPGAPGSPGLPGLRGDPGFHGFPGVKGEK
GNPGFLGPVGPPGQIGPKGPPGVRGDPGTIKIISLPGSPGPPGHAGGPGMQGEPGPLGPP
GILGPCGPRGKPGKDGRPGTPGPTGEKGNKGCKGEQGPPGSDGLPGLKGKPGHIGPPAPE
TMMRGFIFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLLCNINNVCNFASRNDYSYWLSTPAPMPTDMALITGRALEPYISRCTVCEGPTNAIAV
HSQTTDIPSCPNGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLNPQTMFRKPIPSTVKAGELEKIISRCQVCMKRRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaggacggcgcccaggccgcccgctctgttgctgcagctcctgctggtgctt
ctggcggctgcgcccacgacaggcaagggctgtgtctgtaaagacaaaggccagtgtttc
tgtgatgggatcaaaggggagaagggggagaaaggctttcctggacctgttggttctcct
ggccagaagggatttccaggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggactcccaggactcactggtcccaaaggtgtaaggggaataactggattgccggga
ttttcaggtcctcctggacttccaggcaccccaggccatcctgggccttatggacctgct
ggcgtccctggatgcaatgggtctaagggggagcaagggtttccaggcctcccagggata
ccaggctacccagggatcctgggtgctgttggtttgaaaggagaaaagggtgctcctgct
gcaaaaggtatagaacctgatggaagaggtgaccccgggttgccaggagctccgggtttc
cagggtttgccaggccttccaggctttccgggacctgttgggccacctggccctccggga
ttcttaggctttccaggaaccatgggacctccaggacctaagggtcacatgggcgataac
gtgataggacaaaaaggagagcggggtgtgaaaggattgacaggaccccctggaccacca
ggaacggttattgtgacgctaacaggcccagataacagaacggacctcaagggggaaaag
ggagaccagggagccgtggggaaatccggacctcctggaccctcaggacctcctggagaa
tcttatggatctcagaaaggtgctcctggagaacctggcccacagggaaaacctggcaaa
gacggtgcccctggtttccctggcactgagggagccaaaggcaacaggggcttccctgga
ttacggggtgaagacggcattaaggggtggaaaggggacattggccctccaggatttcgt
ggtccaacagaatattacgatgcataccaggaaaagggagatgaaggacttccaggcccc
ccaggccccaaaggagctcgtggcccacagggtcccagtggctctcctggggttcctgga
agtgctgggtcatcgaggcctggcctcagaggagcccccggacctccaggcgtgaaagga
agtaaaggggaacaagggcccccaggaaagaatgcagtggggcctccggggtccccaggt
tgtcccggttcaccaggccctatagggttgccgggatatccaggaccaccaggtggcatc
gtttttcgccaaggtccacccggagatggtggactcccaggccttgtagggtttccagga
atcccaggagtcgatgggcccaaaggggaacctggcctcttgtgcatacaatgtccttgc
atcccagggcccccgggtctcccaggactgccagggttggatggcataaaaggaatacca
ggaggacaaggggcagctggcgttaaaggaagcccagggtacccaggaagtgtgggtctt
ccaggatttccaggattcccggggactccggggggtccaggacttaaaggagaaaaaggt
gaagcacctcagcctgagggagaagtgggtgccccaggggaccccggactcagagggcat
cccggaagaaggggcttggatggaattcctggaactccagggatcaaaggatcaccagga
cccaaaggtgaaccggccctgagtggtgagaagggggaccagggtcctccaggggatctt
ggcacccctgggtccccaggacctgcaggaccgcctggaccaccaaactatggaccacag
ggagagcctggtccaaagggcacccaaggagttcctggagcccctggaccacctggagaa
gccggtcctaaaggagaatttggtatttcaacaccagtcccagggcccccaggacctcca
gggccctctggccatgctggcccccaaggtccacctggtgtccctggatccataggaaaa
tgtggtgatccgggtcttcctgggcctgatggtgaaccaggaattccaggaatcggcttc
cctgggccccctggacctaagggagaacaaggttttccaggagcaaaaggagcaccaggt
tgtccaggagaaatggggaagcccgggtcacctggagaaccgggtctcccaggagccaag
ggagaaccaggactagccatgcctggagaaccaggaacaccaggttttccaggagaaaga
ggcaattctggggaaaatggagaaattggactccctggacctccaggtctccctggaatt
ccaggaaccggaggggttgatggactccaaggggatccagggaagcctggaccacctgga
gaaaaaggatctccaggaaggtgcatggtgggtcccaggggagcccagggacttccagga
ttaaatggattggaagggcagcaagggagaagaggtgaaacagggccaaagggagaccca
ggtattccaggcttggatagatcaggctttcctggagaagctggaccaccaggaatgcca
ggtcatcgaggtgaaatgggacaacctggtcaaaaaggatatccaggaaatccaggattt
ttaggattatcaggtgaaaaaggaatgatggggatgatgggccatccgggaaatactggc
cctcctgggccccccgggaacccaggcaccccaggacagaggggtagctttggaattccg
ggagcaaagggtgagaaagggcccccaggagccaagggggaaaaaggagacaaaggacct
cgggggccttctcaaatatccaatttactgggggacaaaggagaaccaggcctcaaagga
tttgctggaaagcctggtgagaaaggaaacagaggcattccggggttaccaggtttcaaa
ggacacgaagggccacctggaccaccgggtccaccaggcctcaggggagatccgggcagc
attgggaatcctggagagccaggaccacgtggtgggccaggaagcatggggaacatgggg
gtgccaggtcctaaaggacacaggggaactttgggactaccgggtttaactgggagaccg
ggcctcccaggtgttcacggtctccgaggagataagggagagccaggttattcggcaggt
acatggcgaggaccaccgggaccaaagggagacccaggattgccaggtgacatgggaagg
aaaggagaaagagggctacctggcacccctggacattcggggcctgctggaactgaggga
gcccctggaattcccggaagtcctggccacccaggaaagccgggccctgatggtgatttg
gggttaaaaggcatcaaaggcttgcctggttctccaggagtcaaaggccctccaggacct
ccaggattcctaggacctcctggaccggtgggtatgagaggcagccagggacgcgatgga
attcctgggccggcaggagaaaagggagaaacaggtttgctgggggcacatccaggcccg
agagggagccctggtgctccaggagccaaaggagacaggggtgtcccgggcttacctggc
ctcccaggcaggaaaggggcagtgggagatgcggggccgcggggacccactggcgtgatg
ggactcccagggccaccaggttttcctggcgcaatcatccctggccagaaaggaaatcga
ggcccaccaggcttcagaggaaacccaggtgaacctggtcctctgggacctccagggagc
cacgtaagaggcatcaaaggagacaagggactcctgggcgagcctggccccagaggtctg
cctggaactgtaggagctgaggggccaccgggtccaccgggagcaccaggaagcccaggt
ctcccagggctcagaggtgatcctggattccatggatttccaggtgtgaaaggggagaag
ggcaatccgggatttctgggaccagttggacctccagggcaaattgggccaaaaggacca
cctggtgtacgcggagaccctggcacgattaagatcatctcccttccaggaagcccaggg
ccacctggccatgctggaggaccagggatgcaaggagaacccgggccactagggccacca
ggaatcctaggaccctgtgggccaagaggtaaaccgggcaaggacggaagaccaggaact
cctgggccaactggggaaaaaggcaacaaaggctgtaaaggagagcaaggaccacctgga
tcagacggactgccaggcttgaaggggaaacccggacacattgggccacctgcacctgag
acaatgatgagaggctttatcttcacccggcatagtcagaccacagcgattccctcctgt
ccagaagggacagagccgctctatagtgggttttctcttctttttgtacaaggaaatgaa
caagcccatggacaagatctgggaactctcggcagctgcctgcagcggttcaccacaatg
ccattcttgctctgtaacatcaacaatgtgtgtaattttgcctctcggaatgattattca
tactggttgtcaacaccagctccgatgccaacagacatggctctgattactggcagggcc
ctggagccttacatcagcagatgcactgtctgcgaaggtcctacgaatgccatagccgtt
cacagccaaaccactgacattccctcatgtcccaatggctggatttctctctggaaagga
ttttcgtttatcatgttcacaagtgcgggttctgagggcgctggacaggcactggcctcc
cctggctcctgcctggaagaattccgagccagtccatttatagaatgtcatggaagagga
acgtgcaactactattcaaattcctacagtttctggttggcttcattaaacccccaaacg
atgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaagataataagt
cgctgtcaggtgtgcatgaagagaagacaatga
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integrated database retrieval system
