Ursus americanus (American black bear): 123778294
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Entry
123778294 CDS
T07931
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04120
Ubiquitin mediated proteolysis
uar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123778294 (SYVN1)
04120 Ubiquitin mediated proteolysis
123778294 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
uar04121
]
123778294 (SYVN1)
Enzymes [BR:
uar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123778294 (SYVN1)
Ubiquitin system [BR:
uar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123778294 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
zf-RING_Vps41
U-box_ZFPL1
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
123778294
NCBI-ProteinID:
XP_045631475
UniProt:
A0A452RAW5
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIISLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMAPFPPVPPPPSSGEAVAPPSTSAAALPRPSGA
ATTTAGPAASAPGSAPAPEAGPGPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTPEE
LRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVSPTEETAP
AVVTAASPTSIPSSEATTPSPGASSPAPEPEKPPAPESVGTEELPEDGEPDAAELRRRRL
QKLESPIAH
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcactgtctttcgggacgacttcagc
ccccgctttgttgcactcttcactctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggattttatggaacgcagccccaatatctcctggctctttcactgccgc
attatctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcttcagtgcagctggtgtttggctttgagtacgccatc
ctgatgaccatggtgcttaccatctttatcaagtacgtactgcactccgtggacctccag
agcgagaacccctgggacaacaaggccgtgtacatgctctacacggagctgtttacaggc
ttcatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacaccttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaggctgtgaca
gacgccatcatgtctcgccgagccatccgcaacatgaacacactgtatccggatgccacc
ccggaggaactccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccacaccagctgcctgcgttcctggttc
cagcggcagcagacctgccctacgtgccgtatggatgtcctccgggcatcactgccgacc
cagtcaccaccgcccccggaacctgcagatcaggggcccccgccggccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctgtggccccccatggccccctttccacctgtcccacctccccccagctca
ggagaggctgtggctcctccatccaccagtgcagcggcccttcctcggcccagtggagcc
gccaccaccacagcgggccccgccgcctcggcccctggctccgcccccgccccggaggcc
ggccccggcccaggcttccccttccctcctccctggatgggcatgcccctgcctccgccg
ttcgccttccccccgatgcccgtgccccccgcgggctttgccgggctgaccccggaggag
ctgcgggctctggaaggccacgagcggcagcacctggaggcgcggctgcagagcctgcgc
aacatccacacgctgctggacgccgccatgctgcagatcaaccagtacctcaccgtgctc
gcctccctggggccccctcggcctgccacctctgtcagccccactgaggagacggcccct
gcagttgtcaccgctgcctcccccaccagcatccccagttccgaggccaccaccccatcc
cctggagcctcctcgccagcccctgagcctgaaaagcctccagctcctgagtcagtgggc
acggaggagctgcctgaggacggggagcccgacgcagcggagctccgccgccgccgcctg
cagaagttggagtccccgattgcccactga
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