Ursus americanus (American black bear): 123778548
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Entry
123778548 CDS
T07931
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123778548 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123778548 (CPSF3)
03019 Messenger RNA biogenesis [BR:
uar03019
]
123778548 (CPSF3)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123778548 (CPSF3)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123778548 (CPSF3)
U7-dependent histone pre-mRNA processing factors
123778548 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
CopK
Motif
Other DBs
NCBI-GeneID:
123778548
NCBI-ProteinID:
XP_045631933
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSVLSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccgaccccttggagccggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctgttaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagaccagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagtcagtaatatatcagcagacgac
atgctgtatacagagacggacctggaagagagcatggacaaaattgaaaccatcaacttc
catgaagttaaagaagttgcaggaatcaagttttggtgttaccacgcaggccacgttcta
ggagctgccatgttcatgattgagatcgcgggcgtgaagctcttgtacacaggtgatttc
tcaagacaagaagacagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttattattgaatctacttacgggacccatatccatgagaagcgtgaagagcgagaagca
agattctgtaacactgttcatgacattgtgaacagagggggcagaggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgattttagatgagtactggcagaatcac
ccagaactccatgatattcccatatactacgcgtcatctttggccaagaagtgcatggca
gtgtaccagacgtatgtaaatgccatgaatgacaaaatccgcaagcagatcaacatcaat
aatccctttgttttcaagcacattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagcgtcgtcatggcctccccaggcatgatgcagagtggcttatccagagagctc
tttgaaagctggtgcacggataagaggaacggggtcattatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtctgagccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccacggagaa
cagaacgaaatggccagattgaaagcagccctgattcgagaatatgaggacaacgatgaa
gttcacatagaggttcataatcctcggaatacagaagccgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcgggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccctatact
ggtccttttaatttgctctattaccagcttcagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtcatacaggagcca
ggaatggtggtattagaatggctggcgaacccttccaatgatatgtacgcagatacagta
acaactgtgatactggaagtccagtccaacccgaaaataaggaaaggtgcggtgcagaag
gtttctaaaaaattagaaatgcacgtttacagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgtcagtgtaaaagatggctctgttctcagtgtcacagtggat
gggaaaactgctaatataaacttggagacacggacggtggagtgcgaagagggaagcgag
gatgacgaatccctgcgggaaatggtggagctggccgcgcagagactgtacgaggccctc
acccccgttcactga
DBGET
integrated database retrieval system
