Ursus americanus (American black bear): 123778598
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Entry
123778598 CDS
T07931
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03420
Nucleotide excision repair
uar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
123778598 (ERCC4)
03460 Fanconi anemia pathway
123778598 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uar03032
]
123778598 (ERCC4)
03400 DNA repair and recombination proteins [BR:
uar03400
]
123778598 (ERCC4)
DNA replication proteins [BR:
uar03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123778598 (ERCC4)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
123778598 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
Motif
Other DBs
NCBI-GeneID:
123778598
NCBI-ProteinID:
XP_045632015
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MELGLPARPTAMAPLLEYERQLVLELLDADGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVGKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDAKMNKKGKMSEK
MEIKEEQETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQL
REYITIGAEAFLLRLYRKTFEKDTKAEQVWMKFRHEDGPKRMVKSNKRPKDPQNKQRAAT
KERTLKKKKRRLTLTQMMGKSEEPEEEGDVKEGYPRDTDSSPESSLEEIKHEEFDLNLSS
DAAYGILKDPLTILHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEGREGRDEANLDLVRGS
AAAGAPTDTRKAGGQEQNRPQQTIVVDVREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLNNGRLYGQCISMSRYYKRPVLLIEFDPGKPFSLTSRGALHQEIS
SNDVSSKLTLLTLHFPRLRILWCPSPHATAELFEELKQNKPQPDAATAMAVTADSDTLPE
SEKYNPGPQDFLLRMPGVNAKNCRTLMHHVKNVAELASLSQDELAGILGNPGNAKQLYDF
IHTSYAEVVSKGKMRK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggactgccagctcggccgacagctatggcgccgctgctggagtatgagcgg
cagctggtgctggagctactggacgcggacgggctggtagtgtgcgcccgcgggctcggc
gcggaccggctcctctaccacttcctccggctgcactgccacccggcgtgcctggtgctg
gtgctcaacactcagcccgccgaggaggagtactttatcaatcagctgaagattgaaggc
gtcgaacacctcccccgccgggtaacaaatgaaatcacaagtaacagtcgctatgaggtc
tacacacaaggaggtgtgatatttgcaacgagtcgaattcttgtggtcgacttcttgact
gatcgaataccttcggatttaattaccggcatcttggtgtacagagctcacaggataatc
gagtcttgtcaagaagccttcatcttgcgtctgtttcgccagaaaaacaagcgtggcttt
attaaagctttcacagacaacgctgtcgcctttgatactggtttttgtcacgtggaaaga
gtgatgaggaatcttttcgtagggaagctctatctgtggccaaggttccatgtagcggta
aactcgtttttagaacagcacaaacctgaggttgtagaaattcacgtttctatgacgcct
gccatgctcgctatccagactgccatactggacattttaaatgcatgtctgaaggaactc
aaatgccataacccatccctcgaagtggaagatttgtctttagaaaatgctattggaaaa
ccctttgacaagacaatccgccattatctggatcctttgtggcaccaacttggagccaag
actaagtccttggttcaggacttgaagatattacgaactttgctgcagtatctctctcag
tacgattgtatcacattccttaatcttctggaatctctgagagcaacagagaaggctttt
ggtcagaattcaggttggctgtttcttgattccagcacctcaatgtttgtaaatgctcga
gcaagagtttaccatcttccagatgccaaaatgaacaaaaagggcaaaatgtctgaaaaa
atggagattaaagaagaacaagaaacaaaaaaggaattggtcctagaaagcaacccaaag
tgggaagcattaaccgaagtactgaaagaaatcgaggcagaaaataaggagagtgaagcc
cttggtggtccaggtcaagtacttatttgtgcaagtgatgaccgaacatgttcccagctg
agagagtacatcactatcggagcagaggcctttttgctgaggctctacaggaaaaccttt
gagaaggataccaaagctgaacaagtatggatgaaatttagacatgaggacggtccaaag
agaatggtgaaatctaacaaaaggcctaaagacccccaaaacaaacaaagggctgccacc
aaagaaaggactctcaaaaagaaaaagcgaaggttaaccttaactcagatgatggggaag
tcggaagaaccggaagaggaaggggatgtcaaggaaggctatcctagagacacagacagt
agcccagaaagctccttggaagaaattaagcacgaggaatttgacttaaacttgtcctct
gatgccgcatatggaatcctgaaagacccactcaccatcctccatccgctcctgggctgt
agtgacccctatgctctgacaagggtgctccatgaagtggagccaagatacgtggttctg
tacgacgcagaactgacgtttgttcgccagcttgagatttacagggcaagcaggcccggg
aagcctctgagggtctactttcttatatatggaggttcaaccgaggaacagcgctatctc
actgctttgcggaaagaaaaggaagcttttgagaaactcataagggagaaggctagcatg
gtggtccctgaaggaagggaaggtagggatgaagcaaatctggacctggtaagaggctcg
gcggctgcaggtgctcccaccgacactcgtaaagcaggtggccaggaacagaacaggcca
cagcaaaccatagtggtggatgtgcgtgagtttcgcagtgaactcccatccctgatccac
cgtcggggcattgacatcgaaccagtgaccctggaagtcggagactacattctgactccg
gaaatgtgcgtggagcgcaagagcatcagcgacctgattggctcattaaacaacggccgc
ctgtacggccagtgcatctctatgtcccgttactacaagcgcccggtgctgctgatcgag
tttgaccccgggaagcccttctccctcacttcccggggcgcgctccatcaggagatctcc
agcaacgacgtcagttccaagctcaccctcctcacgctgcacttccccagactccggatt
ctgtggtgcccctcgccgcacgccactgccgagctgttcgaggagctgaagcagaacaag
ccacagcccgacgcggccacggccatggctgtcaccgccgattcggacacgctccccgag
tcggagaagtacaatcccggtccccaggacttcttgttaagaatgccaggggtgaatgcc
aagaactgtcgcacattgatgcaccacgtgaagaacgtcgcggaactagccagcctgtcg
caggacgagctggcaggaattctgggcaacccggggaatgccaagcagctctatgacttc
attcacacctcttacgcagaggtcgtgtctaagggaaaaatgagaaaatga
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