Ursus americanus (American black bear): 123778730
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Entry
123778730 CDS
T07931
Symbol
SIX5
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uar03000
]
123778730 (SIX5)
Transcription factors [BR:
uar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
123778730 (SIX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
123778730
NCBI-ProteinID:
XP_045632246
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGEAASG
AEGPGSPGVPGSPPEAAAEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL
RGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRAL
GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL
SLTQVSNWFKNRRQRDRTGGGGGAPCKSESDGNPTTEDESSRSPEDLDRGVAPVAAEAPA
QGSIFLAGATPPTPCPASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASGLGPLL
LTGGSGAPPPQPGPQGASDGKTSLVLDPQTGEVRLEEAQPEAAETKEAQVAASGPAGEEA
AGPLPQVVPGPPPAAPFPLPPGPVPSVAAPQVVPLSPPPGYPAGLGPTSPLLNLPQVVPT
SQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLL
ANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPDPAISVPEGALP
VAPSPALPDVHALGPLSAPQPPPVPAATGAAAAAATAASLPFSPDSSGLLPGFPAPPPEA
LMLSPAAMPIWPAGLELSAGPEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGSTAGSEV
DEGLEAEPKVLTQLQSVPVEDPLEL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggccggcggctgggggggaggcggtggcg
gcggcggcggcgaccgaagaagaggaggaggaagcgcgccagctcctgcagactttgcag
gcggccgagggtgaggcggcggccgcggccggggccggggcgggcgaagcggcgtcggga
gcggagggcccgggatccccgggcgtccccgggtcgcctcccgaggccgctgccgagccg
cccacgggcctccgcttctcgcccgagcaggtggcgtgcgtttgcgaggcgctgctacag
gcgggccacgccggccgcttgagccgcttcctgggcgcactgcccccggccgagcgccta
cgtggcagcgatccggtgctgcgcgctcgggccctggtggccttccagcggggcgagtac
gccgagctctaccggctgctggaaagccgccccttccccgccgcccaccacgcctttctg
caggacctctacctgcgcgcgcgctaccacgaggccgagcgggcccgcggccgcgcgctg
ggcgcagtggacaagtaccgtctgcgcaagaagttcccgctgcccaagaccatatgggac
ggcgaagagaccgtctactgcttcaaggagcgctcccgcgccgcgctcaaggcctgctat
cgcggcaaccgctaccctacgccggacgagaagcgccgcctggccacgctcaccggcctc
tcgctcacgcaggtcagcaactggttcaagaaccggcgacagcgcgatcggaccgggggc
ggcggcggcgcgccttgcaagagcgagtctgacgggaaccccaccaccgaggacgagtcc
agccgcagtccggaggacctggataggggggtggctccggtggctgcggaggcccctgcg
cagggctctatatttctggccggggccacccctcccacgccctgccctgcctcctcctcc
atcctggtgaacgggagcttcctggctgcgggcagctctcccgctgtgctcctcaacggc
agccccgtcatcatcaacagcctggccctcggggaggcctccggcctgggccccctgctg
ctcacgggtggcagtggcgctcctcccccgcagcccgggccccagggggccagtgacggc
aagacctccctggtcctggaccctcagaccggggaggttcgactagaggaggctcagccc
gaggccgctgagaccaaggaggcccaggtggctgcttcagggccggcgggagaggaggct
gcggggcctctgccccaagtggtgcccggccctccaccggctgccccctttcctctgccc
ccaggaccggtgccgtctgtggcagctccccaggtggtgccactttccccaccccctggg
tatcccgcaggcctgggccccacgtccccgctgttgaacctgccccaggtggtgcccacc
tcccaggtggtgaccctgccgcaggcggtggggccgctgcagctgctggcggccgggccg
ggcagccctgtgaaggtggccgcggccgcaggccccgccaacgtgcacctgataaactcc
ggggtgggcgtgaccgccctgcagctgccctctgccaccgccccaggaaactttctcctg
gccaaccccgtgtctggcagccccatcgtgacaggtgtggccgtgcagcagggcaagatc
atcctcacggccaccttccccaccagcatgctggtctcccaggtcctgccgcctgccccc
agcctggccctgcccctgaagccagacccggccatctcagtgccggaaggagccctcccg
gtggcccccagccccgctctcccggacgtccacgccctaggcccactctctgcaccgcag
ccaccgcccgtccctgctgccaccggtgccgccgccgccgctgccaccgccgccagcctg
cccttctccccggattcctccggtctcctacccggcttcccggcgcccccgccagaggcg
ctcatgctgtcgcctgcagccatgcccatctggccagcgggcctggaactgagtgcgggc
ccggaagggctgctggaagctgagaaggggctggggacgcaggccccccatacggtgctg
aggctgccagaccccgaccccgaggggctgctcctggggtccacggcaggcagcgaggtt
gacgaggggctggaagctgagcccaaggttctgacccagctacagtcggtgcctgtggaa
gatcccctggaactgtga
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