Ursus americanus (American black bear): 123778943
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Entry
123778943 CDS
T07931
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123778943 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
uar04131
]
123778943 (VPS8)
Membrane trafficking [BR:
uar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123778943 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
GED
zf-C3HC4
EIF3I
ANAPC4_WD40
PHD
Motif
Other DBs
NCBI-GeneID:
123778943
NCBI-ProteinID:
XP_045632580
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLRPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
LLQMSPCVTEQFIELLCQFSPSQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLKRLQSKLQEITHQDEKTKEEFSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSAAPHLPPEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIETEGQTRWTCYKCSSSNKAGKLSE
NSSEVKKGKTAPSQVKMSPSCHPSKGDSAVKKAASEPVLDPQQIQAFDQLCHLYRGSSRL
ALLTELSQNRSSESYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgccaagactactgaa
gaagagctgaataagtctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgacctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactcaatgagactgatgatgaagaggag
tcttttgttcttgaggatcctacgttgttaaacattgatactattgattctcactcctat
gatacttcgtctgtggcaagttcagatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagctgtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactctgtctgggtagcactagtgttggaggtcagtatgga
gccatctctgctctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaa
ggacagatcacgatgtgggatttagccagtggaaaacttctcagatcaataacagatgct
catcctccaggaacagcaatattacatattaagtttacagatgatccaactcttgcaatt
tgtaatgacagcggaggctctgtttttgaattgacatttaagagagtgatgggggtgaga
acatgtgaatctagatgtctgttcagtggttccaagggggaagtttgctgtattgagcct
ctccattcgaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaaaccgtccttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggcg
gtacataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgagtctggagcaatacatgtcactaagcaaaagcaccttcacctc
tactatgatctcatcaactttacttggataaactcacgcacagttgtgctcttggatagt
gtggagaaattgcatgtgattgatcggcagactcaagaggaactggaaacagtggagatc
tcagaagttcaattggtctataacagcagccatttcaaatccctagccactggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctaaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatcaggggatgtcagtaag
cgaaaggctgttgttgcagatcggatggtagaaatcctattccactatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatg
gtgcctgtcatcgttgattactgcctgctgttggagcgaaaggatcttttatttagccag
atgtatgacaaactaagtgagaattcagtggccaaaggagtgtttttggagtgccttgag
ccatatattttaagtgataaactggtggggatgaccccccaggtaatgaaagacttgatt
gttcatttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gctatgatctatgtctacaacagaggcatgaatgaattcattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaggacgctaacagatgagcaagttgtt
atgggcaacaagcttcttgtatatattagctgttgtcttgcaggccgagcctatcccctt
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtatttgaatttctgatt
cgcctgcattcagcagaagcttcccccgaggaagaaatctacccctatgttaggactctg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagctgtagaatatcagcaacgaattgtggatattttgttgaaagttatg
gtggagaattccgattttactccctcacaagtagggtgtctctttacattccttgcccgg
cagcttgcaaagcctgacaataccttgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggagggatcgttcagtttgaagagagtcggctcatccggatggca
gaaaaagcagagttctatcaaatttgcgagtttatgtatgaacgagaacatcaatatgac
aaaataattgattgctacttacgcgacccgctaagggaggaagaagtctttaactacatt
cacaatatcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaa
gcaatggatcatatcgaggaacttgtatccctgaggccctgtaaagctgcagagctggtt
gccactcacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaagag
ttgctgcagatgtctccgtgtgttacagagcagttcattgagctgttatgtcagttcagc
ccaagccaggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccagaagtatcaacttcatgaagtcactgcctatctattagaaaaaaaagga
gatattcatggtgccttcttaataatgctgaagagactacaaagcaaacttcaagagata
acacatcaagatgaaaaaaccaaagaggagttctcattgaaggacgttgaagataccatg
gtagagaccattgccctttgccagagaaattcacataatttgaaccagcagcaacgagag
gcactctggtttccattattggaggcaatgatggcccctcagaagctgtctggttcagct
gcacctcatctaccccctgaagctctgaaatctttgaccatgcaagttctaaacagcatg
gcggcgtttattgcccttccgtcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggatacctttaactat
gaacaaacactgctggaaacaactactagccttctaaaccaagacctccattggtcattg
tgtaacctgagagcttcagtcaccagaggactgaatcccaagcaggattactgctctata
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaatcattgtcttcagctgt
ggccatttgtatcactcattctgtctgcaaaacaaagagtgcaccatagagactgagggg
cagacgagatggacatgctacaaatgcagctcaagtaacaaagcagggaaattaagtgaa
aattcatctgaagttaagaaggggaagacagccccatcccaggtaaaaatgtctccttct
tgtcatccatccaaaggagattctgctgttaagaaggcagcctcggaacccgtcctggac
ccacagcaaatccaagcgtttgatcagctttgccatctctaccgaggaagttcccggctg
gctctcctcacagaactctcccagaatcgcagcagtgagagctacaggccattcagtggc
tcccagagcggccccgctttcaacagcatcttccagaatgagaatttccagctacagctc
attcccccacctgtgactgaggactga
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integrated database retrieval system
