Ursus americanus (American black bear): 123779049
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Entry
123779049 CDS
T07931
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
uar
Ursus americanus (American black bear)
Pathway
uar05014
Amyotrophic lateral sclerosis
uar05017
Spinocerebellar ataxia
uar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123779049 (ATXN2)
05017 Spinocerebellar ataxia
123779049 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
123779049 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123779049 (ATXN2)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123779049 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
123779049
NCBI-ProteinID:
XP_045632738
LinkDB
All DBs
Position
Unknown
AA seq
1144 aa
AA seq
DB search
MSLKPQQQQQQQQQQQQQQQPPAAANARKPGGSGGLLTSPAAAPSSVSSSSAVASSSSAV
AAASAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYE
GVFKTYSPKCDLVLDAAHEKSMESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRD
AFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGV
VSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKY
TAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPPRSTSH
TSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSR
PSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVS
HTPPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTAGGPVLASPQ
AGVIPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPSET
SPSFSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDL
IKDKIEPNAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPG
CKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGH
QQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQD
QHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPV
IQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSL
AQQYAHPNAALHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQ
QSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQA
HVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHH
QQQL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcaacaacaacagcagcagcagcagcagcagcagcagcagcag
ccgcccgcggccgccaatgcccgtaagcccggcggcagcggcggccttctcacgtcgccc
gccgctgcgccgtcctcagtctcgtcgtcctcggccgtggcttcctcctcctccgcggtg
gcggcggcgagcgcaggaggcgggcggcccggcctgggcagaggtcgaaacagcaaagga
ctgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggttcatata
cttacatcagttgttggatccaaatgtgaagtacaagtgaaaaacggaggtatatatgaa
ggagtttttaaaacatacagtcctaagtgtgatttggtacttgatgcggcacatgagaaa
agtatggaatccagttcggggccaaaacgtgaagaaataatggagagtattttgttcaag
tgttcagattttgttgtggtacagtttaaagatatggactccagttacgcaagaagagat
gctttcactgactctgctatcagtgctaaagtgaatggtgaacacaaagagaaggacctg
gagccctgggatgcaggtgaactcactaccaatgaggaactagaggctttggaaaatgac
gtatctaatggatgggatcccaatgatatgtttcgatataatgaagaaaattacggtgta
gtgtctacatatgatagcagtttatcttcatatacggtacccttagaaagggataactca
gaagaattcttaaaacgagaagcaagggcaaaccagttagcagaagaaattgaatcaagt
gcccagtacaaagcccgggtggccctggaaaatgatgataggagtgaagaagaaaaatac
acagccgttcagagaaattccagtgaacgtgagggccacagcataaacactagggaaaat
aaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtgggagacag
aattcaccgcgtatgggccagcctggatcgggctccatgccaccaagatccacctctcac
acttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccc
tggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtccc
aactctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcgcgg
ccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctctactatg
cctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcgacaccct
cgaaatcacagagtttctgctgggaggggttccatttccagtggcctagaatttgtatcc
cataccccaccaagtgaagcagctgctcctccagcagcaagaactagtcctgcggggggc
acatggtcatcagtggtcagcggggttccaagattatcccctaaaactcacagacccagg
tctcccagacagaacagtattggaaatactgctggtgggccagttcttgcttctccgcaa
gctggtgttattccagccgaagcggttgctatgcctgttccagccgcatctcctacgcct
gccagtcctgcatccaacagagctgttaccccgtctattgaggctaaggattccaggctt
caagatcagcggcagaactctcctgcagggaataaagaaaatatgaagcccagtgagaca
tcacctagcttctcaaagactgaaaataaaggtatatcaccaattgtttctgaacataga
aaacagattgatgacttaaagaagtttaagaatgattttaggttacagccaagttctact
tctgaatctatggatcaactgctaaacaaaaatagagagggagaaaaatcaagagatttg
atcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagcagcagcaat
tgcaccagtggcagcagcaaaccgaacagtcccagcatttccccttcaatcctcagtaac
acggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagtccagga
tgtaaacaagagaaagatgataaagaggagaagaaagatgcagctgaacaagtgagaaaa
tccactttgaatcctaatgcaaaggagttcaaccctcgttccttttctcagccaaagcct
tctaccaccccaacttcacctcgtcctcaagcacaacctagcccgtctatggtgggccat
cagcagccagctccagtttatactcagcctgtttgttttgcaccaaatatgatgtatcca
gtcccagtgagcccaggcgtgcaacctttataccctatacctatgacgcccatgccagtg
aatcaagccaagacatatagagcaggtaaagtaccaaatatgccccagcagcggcaagac
cagcatcatcagagcaccatgatgcacccagcctcagcagcaggcccaccgattgtggcc
accccaccagcttattccacacaatacgttgcctatagtcctcagcagtttccaaatcag
cctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagtcctgtg
atacagggtaatgctaggatgatggcaccgccagcacatgcccagcctggtttagtgtct
tcttcagcaactcagtacggggctcatgagcagacgcatgcgatgtatgcatgtcccaaa
ttaccatacaacaaggagacaagcccttctttctactttgccatttctactggctccctt
gctcagcagtatgcgcacccgaatgctgccctgcacccgcatactccacatccgcagcct
tcagctacccccacgggacagcagcagagccagcacggtggaagtcatcctgcacccagt
cctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtccacagcag
cagtcagccatttaccacgcggggcttgcaccaaccccaccttccatgacccctgcctcc
aatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtctttacaatccat
ccttctcatgttcagccggcatacaccaatcctccccacatggcccacgtacctcaggct
catgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatg
acgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccatt
ccagtctcgacaacagcgcatttcccttatatgacgcacccttcagtacaagcccaccac
caacagcagttgtaa
DBGET
integrated database retrieval system