KEGG   Ursus americanus (American black bear): 123779049
Entry
123779049         CDS       T07931                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
uar  Ursus americanus (American black bear)
Pathway
uar05014  Amyotrophic lateral sclerosis
uar05017  Spinocerebellar ataxia
uar05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:uar00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    123779049 (ATXN2)
   05017 Spinocerebellar ataxia
    123779049 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    123779049 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uar03019]
    123779049 (ATXN2)
Messenger RNA biogenesis [BR:uar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123779049 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 123779049
NCBI-ProteinID: XP_045632738
LinkDB
Position
Unknown
AA seq 1144 aa
MSLKPQQQQQQQQQQQQQQQPPAAANARKPGGSGGLLTSPAAAPSSVSSSSAVASSSSAV
AAASAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYE
GVFKTYSPKCDLVLDAAHEKSMESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRD
AFTDSAISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGV
VSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKY
TAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPPRSTSH
TSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSR
PSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVS
HTPPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTAGGPVLASPQ
AGVIPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENMKPSET
SPSFSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRDL
IKDKIEPNAKDSFIENSSSNCTSGSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSSPG
CKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGH
QQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQD
QHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPV
IQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSL
AQQYAHPNAALHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQ
QSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQA
HVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHH
QQQL
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgtcgctgaagccccagcaacaacaacagcagcagcagcagcagcagcagcagcagcag
ccgcccgcggccgccaatgcccgtaagcccggcggcagcggcggccttctcacgtcgccc
gccgctgcgccgtcctcagtctcgtcgtcctcggccgtggcttcctcctcctccgcggtg
gcggcggcgagcgcaggaggcgggcggcccggcctgggcagaggtcgaaacagcaaagga
ctgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggttcatata
cttacatcagttgttggatccaaatgtgaagtacaagtgaaaaacggaggtatatatgaa
ggagtttttaaaacatacagtcctaagtgtgatttggtacttgatgcggcacatgagaaa
agtatggaatccagttcggggccaaaacgtgaagaaataatggagagtattttgttcaag
tgttcagattttgttgtggtacagtttaaagatatggactccagttacgcaagaagagat
gctttcactgactctgctatcagtgctaaagtgaatggtgaacacaaagagaaggacctg
gagccctgggatgcaggtgaactcactaccaatgaggaactagaggctttggaaaatgac
gtatctaatggatgggatcccaatgatatgtttcgatataatgaagaaaattacggtgta
gtgtctacatatgatagcagtttatcttcatatacggtacccttagaaagggataactca
gaagaattcttaaaacgagaagcaagggcaaaccagttagcagaagaaattgaatcaagt
gcccagtacaaagcccgggtggccctggaaaatgatgataggagtgaagaagaaaaatac
acagccgttcagagaaattccagtgaacgtgagggccacagcataaacactagggaaaat
aaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtgggagacag
aattcaccgcgtatgggccagcctggatcgggctccatgccaccaagatccacctctcac
acttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggtgttccc
tggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggtccc
aactctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcgcgg
ccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctctactatg
cctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcgacaccct
cgaaatcacagagtttctgctgggaggggttccatttccagtggcctagaatttgtatcc
cataccccaccaagtgaagcagctgctcctccagcagcaagaactagtcctgcggggggc
acatggtcatcagtggtcagcggggttccaagattatcccctaaaactcacagacccagg
tctcccagacagaacagtattggaaatactgctggtgggccagttcttgcttctccgcaa
gctggtgttattccagccgaagcggttgctatgcctgttccagccgcatctcctacgcct
gccagtcctgcatccaacagagctgttaccccgtctattgaggctaaggattccaggctt
caagatcagcggcagaactctcctgcagggaataaagaaaatatgaagcccagtgagaca
tcacctagcttctcaaagactgaaaataaaggtatatcaccaattgtttctgaacataga
aaacagattgatgacttaaagaagtttaagaatgattttaggttacagccaagttctact
tctgaatctatggatcaactgctaaacaaaaatagagagggagaaaaatcaagagatttg
atcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagcagcagcaat
tgcaccagtggcagcagcaaaccgaacagtcccagcatttccccttcaatcctcagtaac
acggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagtccagga
tgtaaacaagagaaagatgataaagaggagaagaaagatgcagctgaacaagtgagaaaa
tccactttgaatcctaatgcaaaggagttcaaccctcgttccttttctcagccaaagcct
tctaccaccccaacttcacctcgtcctcaagcacaacctagcccgtctatggtgggccat
cagcagccagctccagtttatactcagcctgtttgttttgcaccaaatatgatgtatcca
gtcccagtgagcccaggcgtgcaacctttataccctatacctatgacgcccatgccagtg
aatcaagccaagacatatagagcaggtaaagtaccaaatatgccccagcagcggcaagac
cagcatcatcagagcaccatgatgcacccagcctcagcagcaggcccaccgattgtggcc
accccaccagcttattccacacaatacgttgcctatagtcctcagcagtttccaaatcag
cctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagtcctgtg
atacagggtaatgctaggatgatggcaccgccagcacatgcccagcctggtttagtgtct
tcttcagcaactcagtacggggctcatgagcagacgcatgcgatgtatgcatgtcccaaa
ttaccatacaacaaggagacaagcccttctttctactttgccatttctactggctccctt
gctcagcagtatgcgcacccgaatgctgccctgcacccgcatactccacatccgcagcct
tcagctacccccacgggacagcagcagagccagcacggtggaagtcatcctgcacccagt
cctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtccacagcag
cagtcagccatttaccacgcggggcttgcaccaaccccaccttccatgacccctgcctcc
aatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtctttacaatccat
ccttctcatgttcagccggcatacaccaatcctccccacatggcccacgtacctcaggct
catgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatg
acgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccatt
ccagtctcgacaacagcgcatttcccttatatgacgcacccttcagtacaagcccaccac
caacagcagttgtaa

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