Ursus americanus (American black bear): 123779643
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Entry
123779643 CDS
T07931
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03008
Ribosome biogenesis in eukaryotes
uar03013
Nucleocytoplasmic transport
uar03015
mRNA surveillance pathway
uar05014
Amyotrophic lateral sclerosis
uar05164
Influenza A
uar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123779643
03015 mRNA surveillance pathway
123779643
03008 Ribosome biogenesis in eukaryotes
123779643
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123779643
05168 Herpes simplex virus 1 infection
123779643
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123779643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123779643
03009 Ribosome biogenesis [BR:
uar03009
]
123779643
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123779643
mRNA cycle factors
Stress granule specific factors
123779643
Ribosome biogenesis [BR:
uar03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123779643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
Motif
Other DBs
NCBI-GeneID:
123779643
NCBI-ProteinID:
XP_045633936
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MCNKREPEGACRGHYLYLVLGKDDRPGISIYVSRCTVPYSVRYKLEPEEMEPLKHLLGHD
IDIILNRGNCMAATLQIAEENYPELLSLNLSNNKPYGLDGLSDIIQVVSTVKILNLSKNE
FICTFTQTFTASPASNSSLLPTAHRLPGAAEMMEVFSTESGMNLQWSLKSVLEKRFTIEL
PNEERVQIKGGKNHRPLTLTPDPVTPYRTTHGNFICTISFFKEKGWGALFAALVPLQNLQ
ELKEKTCFFDVNLQRRKHQSGAATASLKYMPSLLSVEQLYSPISKLTCVLHIPLKSRRGK
SVANLQQLSLVVSKPPAPDPTDSLHKQPGRTLVTGHCLQSTPWVSWSARGLGLRSPEGHN
DVGNSLQRRTRCWGIYRRRYNNWSEQVSSGGHSSSHQQQDGDPATNGAHTSTRVRYAPYA
IPPRHRRGNFQKQDQTQANVEGKQKPPERRVEQERQDETMGKWYKIIIPFGIKYDEKWLL
DLIQGQCSVPFTPVEFHYERMQAQFFVEDASVAFALKGVNGKIWDEANERISIFIYPSGT
PHSVQKELKSEKVEQTKLTMNKRYVVSQQALNIQRVHFGPDLITHDIEMVPSLRNSMAAT
LQTHEKNMPEVKSAGELDQGKSLQPEEMSAGGSPPCTAFPDKSTNISSILELFPKLLRLD
SQESPSPTSVGIAAHKRLPTCKGSFFGSDALKSLVLRFLQQYYLIYDSGDRQGLLGAYHN
EACFSLAIPFNPGEPAASSLCEYFKENRNMKKLKDPSLRVQLLKRTKCDIMRSLCVLPKT
QHDLSSFVVDMWFQTEMMLCFSVNGVFKEAVGMSQDSVRAFTRTFITTPVSKYSLCIVND
DLFVRDASPKETPSTVSIPVPTPSCSSWPTLCQKRQEMGQTFSTQSGMNLQWFQKXLHDS
QWDYIGSHLAQ
NT seq
2734 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaacaaaagagaaccagagggtgcatgccgaggacattacctgtacctagtcctg
gggaaggacgacaggccagggatatctatctatgtcagtcgctgtactgtaccctactct
gtgcggtataagttggagccagaagaaatggagccgctaaagcacttgctgggccatgat
atagatataatcctgaatcgagggaattgcatggctgccaccctgcagatcgctgaagag
aattaccctgagctgttgtccttgaacttgagcaacaacaagccatatgggctggatggc
ctgtctgacattatacaggtggtctccacagtcaagatcctgaacctctccaaaaacgag
tttatctgtaccttcacccagaccttcactgcttcccctgccagcaattccagcctcttg
cccaccgcccaccgtctcccaggagcagcagaaatgatggaggttttctccaccgagtct
gggatgaacctccagtggtctctgaaatcggtattggaaaagcggtttaccattgagctc
ccaaatgaagagagagtgcagataaaaggaggcaagaatcacaggcccttgaccctgaca
ccagaccccgttaccccctacaggaccacgcacgggaatttcatctgtaccatcagcttc
ttcaaagagaagggctggggagctctattcgcagctcttgttcctctgcagaatctccaa
gagctcaaagagaaaacgtgcttctttgatgttaacctgcagagaaggaagcatcaatct
ggagctgcaacagcttctctgaagtacatgccctcattgttgtctgtggaacagctctac
agtccaatttctaaactgacctgtgtcctgcacatccccctcaaaagtagaagaggcaaa
tctgtggcaaatcttcagcagctgtccctggttgtctccaaacctccagctccagacccc
acggattctcttcacaagcaacctgggaggacactggtgacaggtcactgccttcagtcc
acaccatgggtgagttggtcagcacgaggccttggcctcagatccccagaagggcataat
gacgtaggtaactccttacaaagaagaacaagatgctggggtatttaccgaaggagatac
aacaactggtctgaacaagtcagttctggcggtcattcttcgtcccaccagcaacaagat
ggagatccagcaacaaatggcgctcacacaagcacccgagtaagatacgctccctatgcc
attccaccgcgtcatcggagaggcaattttcagaaacaagaccaaacccaagctaacgtg
gagggaaagcaaaagcctccagagagaagagtggagcaggagaggcaggatgagaccatg
gggaaatggtacaagatcattattccattcggcatcaaatatgatgagaagtggctgctg
gatctgattcagggacaatgcagtgtcccattcacccccgtcgagtttcactatgagaga
atgcaggcccagttctttgttgaggatgccagcgttgcctttgcattgaagggtgtcaac
ggcaagatctgggatgaggctaatgaaaggatctctatctttatctacccctctggcaca
ccccactctgtgcagaaggagctgaagtcagaaaaggtggagcagacaaagctgaccatg
aacaaacgatatgtagtctcccagcaagctcttaacatccagagagtccactttggccct
gacttgatcacccatgatattgaaatggtaccgagtcttagaaacagcatggctgccacc
ctgcagacccatgaaaagaacatgcccgaggtgaagtctgcaggggagttggaccagggc
aaaagtctgcagccagaagagatgagtgccggcggaagccccccatgcactgccttccct
gataaatcaaccaacataagctccatcctggaactgtttcccaagttattacgcctggac
agccaggagtcaccctcgccaacgagcgttggtattgctgcccacaagaggttaccaacc
tgcaagggaagcttctttggatctgatgcgctgaagagtctagtcctgcgattcctgcag
cagtactacttgatctacgactctggagaccgtcagggtctcctcggtgcctaccacaat
gaggcctgcttctccctggccattcccttcaaccccggggagccagccgcaagcagcttg
tgcgaatacttcaaggaaaacaggaatatgaagaagctcaaggacccctccctgcgtgtt
cagctgctgaagcgtacaaaatgtgacatcatgcgctccctctgtgtgctgcccaaaact
cagcatgacctcagctccttcgtggtggacatgtggttccagacggagatgatgctctgc
ttctctgtcaacggggtgttcaaggaagcggtaggcatgtctcaggattctgttcgtgcc
ttcacccggaccttcatcactacccctgtcagcaagtacagtctatgcatcgtgaacgat
gatttgtttgtgagggacgccagccccaaggagaccccgagcacagtctctatcccagtg
cctacaccctcctgcagctcctggcccaccctttgccagaagcggcaggaaatggggcag
actttctccacccagtctgggatgaatctccagtggtttcagaagtgacttcatgacagc
cagtgggactacattggttctcacttggcccaag
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