Ursus americanus (American black bear): 123780497
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Entry
123780497 CDS
T07931
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123780497 (TNRC6B)
03036 Chromosome and associated proteins [BR:
uar03036
]
123780497 (TNRC6B)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123780497 (TNRC6B)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123780497 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
123780497
NCBI-ProteinID:
XP_045635403
LinkDB
All DBs
Position
Unknown
AA seq
1763 aa
AA seq
DB search
MSQVWTSESRLDRASCLTATLLSMPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAV
PNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSTAPGANSN
NAQVTGTPLQSDSGTAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIWDKVIVDGS
DTEEWPCIASKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECN
LGVWKSDPKTKAVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALV
QEGNSRKGALETDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKN
GNTNSLNLSSPNPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTD
TASGQSNSGNNGNNGKDREDSWKGASVQKSSGSKNDSWDNNNRSTGGSWNFGPQDSNDNK
WGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQA
PCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDP
RVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQ
MKSGWGELSASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTSSSWNENSSKDQGWGGG
RQPNQGWTSGKNGWGEEVDQAKNSSWESSASKPVSGWGEGGQNEIGTWGNSGNASLASKG
GWEDCKRSPAWTETGRQPNSWNKQHQQQQQPQQPPPPQPEASGSWGGPPPPPPGNGRPSN
SNWSSGPQPVTPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQ
GGPAPREPNLPTPMTSKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGW
GNAPSNAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTAGSQGSASSHNS
ASWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPGSKMDLSVGSLPDKKF
DVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGNHGLFGNSTAQSRGMH
TPVQPLNSSPNLRAQVPPQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQL
PQIPQFQLACQLLLQQQQQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQQQQQQRQ
PGMKHSPSHPVGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEA
GTESRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPSDTLGGHTG
PAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTA
TSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWS
PDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDS
RLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRY
NTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLE
TGQTQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPAVED
PHRMGSPAPLLPGDLLGGGSDSI
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagtttggacttcggaaagcaggttggatcgggcatcctgcctaacagccaca
ttgctctccatgcccgaagtgacgaaaccaagtttaagccaaccaacggccgccagccca
attggcagctctccatcgccaccagtcaatggtggcaacaatgccaaaagggtggcagtg
ccgaacggacaaccgccaagcgccgcccgctacatgcctcgggaggtgccgccgcgattc
cgttgccagcaggaccacaaagtgttactaaaacgtgggcagccccctccaccgtcctgc
atgctcctcgggggtggggcagggcctcctccctccacagcacctggagcaaactcaaac
aacgcacaagtgacaggaacgccgctgcagagtgacagtgggactgcaccagagtcaacc
cttggaggtgctgctgcttcaaattatgcaaattccacttggggcccgggagcctcctcc
aacaacggcgcctcccccaacccaattcacatctgggacaaggtgattgtagacgggtct
gacacggaagagtggccttgtattgccagcaaagacactgagtcttcttccgaaaacacc
accgataacaacagtgcctcgaaccctggctctgagaagagcactctgccaggaagcacc
actagtaacaaaggaaaagggagccagtgccagtctgcaagttctgggaacgaatgtaat
cttggggtctggaaatctgaccctaagactaaagctgttcaatcttccaactctactaca
gagagcaacaatggactaggaaattggaggaatgtgagtggtcaggatagaattggacct
ggctctggcttcagcaactttaacccaaatagcaacccatctgcctggccagcgctggtc
caagaaggaaattctaggaaaggggcattggaaacggatactagtaattccagtgcacag
gttagcacagtaggtcaggcatccagggaacagcagtcaaagatggaaaatgcgggtgtt
aattttgttgtctctggcagagaacaggctcaaattcataacactgatggaccaaaaaat
ggaaacactaactccttgaacttaagttcaccaaaccccatggagaataagggaatgccc
tttggaatgggcttggggaacgcctccaggagcactgatgccccttcacaaagcactgga
gatcgaaagactgggagtgttggatcttggggtgcagctagggggccttctggaactgac
acagcctctggacaaagcaattctggaaacaatgggaacaatggaaaggatagagaggac
tcctggaaaggagcttctgttcagaaatcatctgggtcaaaaaacgactcttgggacaac
aataacaggtctacgggtgggtcctggaactttggccctcaggactctaatgacaacaaa
tggggtgaagggaacaaaatgacatctggggtctctcagggagaatggaaacagccgact
gggtctgatgagttgaaaattggagaatggagtggtccaaaccaaccaaattctagcact
ggagcatgggacaatcaaaagggccaccccctccctgaaaaccaaggcaatgcccaggct
ccctgttggggaagatcttccagctccacaggaagtgaagttggaggtcaaagcactgga
agcaaccacaaagcaggaagtagtgacagtcataattctggccgtcggtcataccggccc
acacatcctgattgtcaggctgtcttacagactcttttgagccgaactgatttggacccc
agggtgctctcaaacactggctggggccaaactcaaattaagcaggacacagtgtgggat
attgaagaggtgccaaggcctgaggggaaatctgacaaaggaactgaggggtgggagagc
gctgccacacagaccaagaactcagggggctggggagacgcacccagccaaagcaatcaa
atgaagtctggatggggggagctctcagcctctacagagtggaaagaccccaagaacaca
ggaggctggaatgactacaagaacaacaactcttccaactggggaggcggtcgaccagat
gaaaagacatcttcctcttggaatgagaactccagcaaggatcaggggtggggaggggga
cgccagcccaatcaaggatggacttctgggaagaatggttggggagaggaagttgatcaa
gcgaaaaacagcagttgggaaagttctgcaagtaaacctgtgtctgggtggggtgaagga
gggcagaatgaaattggaacttgggggaacagtgggaatgcaagcctagcttccaaaggc
gggtgggaagattgcaaaaggtctccagcatggactgagactggcagacagcccaattcc
tggaataaacagcaccaacagcagcagcagccacagcagccaccgccaccacaaccagag
gcttctggttcatggggaggcccacccccaccacctccaggcaacggacgaccttccaat
tccaactggagcagcgggccacagccagtaacccccaaggatgaggaacccagtggttgg
gaagagccatccccgcagtcaattagtcggaaaatggacatcgatgatggcacttcggca
tggggagaccctaacagttacaactacaagaatgtgaatctgtgggataagaattcccaa
gggggcccagcacctcgagaaccaaacctgcctaccccgatgaccagtaaatcagcatca
gtctggagcaaaagcacaccacctgctccagataatggtacttcagcttggggtgagcca
aacgaaagcagtcctgggtggggcgaaatggatgacacaggagcatcgaccacgggctgg
gggaacgcaccctccaatgctccaaatgccatgaaacctaattccaaatctatgcaagac
ggctggggggagagtgatggtccagtgacgggaactcgccatcccagctgggaagaggag
gatgatggaggagtctggaacaccgccggctctcagggaagtgcttcctcccacaactca
gcaagctggggacaaggaggaaagaagcaaatgaagtgctcactgaaaggaggaaacaat
gattcatggatgaatcctcttgccaaacagttttcaaatatgggattgctgagtcaaact
gaagataatccaggcagcaaaatggatttgtctgtagggagccttccagataaaaaattt
gacgtggacaagcgagcgatgaatctcggggattttaatgatatcatgaggaaggatcga
tctgggttccgtccacctaattccaaagacatgggaaccacagatagtgggccttatttc
gagaagggtggcaatcatggtttgtttggaaatagcacagcacaatcgagaggtatgcac
acgccagtgcagccactaaattcttctcctaatctccgggcgcaagtgcctccccagttt
atttccccccaggtttctgcctcaatgctcaagcagtttcccaacagtggcctgaatcca
ggtcttttcaatgtggggccccagttatctcctcaacaaattgccatgctgagccagctt
ccacaaattccccagtttcagttggcatgtcagcttctcctgcagcagcagcaacagcag
cagttgctgcagaaccagaggaagctttctcaagctgtgcgccagcagcaagagcaacag
ctggctcggatggtgagcgctctccagcagcagcagcagcagcagcagcagcagaggcag
cctggcatgaagcattcgccctctcatcccgttgggcccaagccacatctggacaacatg
gtacccaacgctctgaatgtggggctcccagaccttcaaaccaaagggccaatacctgga
tatggttctggcttcagctctggcggcatggactatggcatggttggtgggaaggaggct
ggaacagagtctcgctttaagcagtggacctccatgatggagggactgccctctgtagcc
acacaggaagccaatatgcacaaaaatggcgctatcgtggcccctggtaagactcgagga
gggtcaccatacaaccagtttgatatcatcccgagtgacacactgggtggccatacgggt
cctgctggtgatagctggttacctgccaaatctccaccaacaaataaaatcggaagtaaa
tccagcaatgccagttggcctccagaattccaaccaggagtgccgtggaaaggtatccaa
aacattgaccctgaatctgacccctatgtcaccccaggaagtgtgctggggggtacagcc
acatctcccattgtagatactgaccaccaacttctgcgggataacaccacagggtctaat
tcttccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctctgacaac
tcctttaccaacgttcatagcacttcagcaaagttccctgattacaaatcaacatggtcc
ccagatcccataggacacaaccccactcatctctccaacaagatgtggaaaaaccatatt
tcctcaaggaacactacaccgctgccccgcccacctcccggtctgaccaaccccaaacca
tcatctccctggagcagcacagcaccccgatcagtcagggggtgggggacacaggactca
cggcttgcctcggcctctacctggagtgatggtggttcagttcgtcccagttactggctg
gttcttcacaatctcactccgcagattgatgggtcaacgttgagaaccatctgcatgcag
catggcccactgctgacattccatctgaacctaacccagggcaccgccctgatccgatac
aacaccaaacaggaggcggccaaggcccaaactgcactgcacatgtgtgtgttgggaaac
actaccatcctggctgagtttgccaccgatgatgaagttagccgctttctggcacaagct
cagccccctacacctgcagcaaccccaagtgcacccgccgcaggttggcagtcgctggag
accggccagacccagtcagatcccgttggacctgctctgaatcttttcggtgggtccaca
gggctcgggcaatggagcagcagtgctggtggcagcagtggggccgatcttgctggcgct
tcgttgtgggggcccccaaactattcttctagcttgtggggagtcccagctgtggaagat
ccccataggatgggcagccctgctcccttactacctggtgaccttctgggaggagggtcg
gattcaatctga
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integrated database retrieval system
