Ursus americanus (American black bear): 123781127
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Entry
123781127 CDS
T07931
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
123781127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
uar04040
]
123781127
Ion channels [BR:
uar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123781127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
PFF1_TM
FraC
Motif
Other DBs
NCBI-GeneID:
123781127
NCBI-ProteinID:
XP_045636456
LinkDB
All DBs
Position
Unknown
AA seq
1998 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHSIERNVTMNY
NGTLVNETRFEFDWKSYIQDTRYHYFLEGVLDALLCGNSSDAGQCPEGYVCVKAGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAVTASEHSREPSATGGLS
DSSSEVSKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESR
QKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYP
MTEHFNNVLAVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLAN
VEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYKDCVCKISTSCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTV
FMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGIAYVKRKIY
EFIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLRDVNGTTSGIGTGSS
VEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSS
SEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTC
FRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKW
VAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINTTTGDMFDISEVN
NHSDCLKLIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQP
KYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEYVTT
ILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSS
VKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WEKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAF
TKRVLGESGEMDALRIQMEERFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLL
KRTVKQASFTYNKNKIKGGANLLVKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTK
PIVEKHEQEGKDEKAKGK
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcggctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aagaaagatgatgacgaaaatggcccaaagccaaatagtgacttggaagctgggaagaac
cttccctttatttatggagacatccctccagagatggtgtcagagccgctggaggacctg
gacccatactatatcaacaagaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcactattttgaca
aactgtgtgtttatgacaatgagtaaccctcccgactggacaaagaatgtagagtacacc
ttcacaggaatatatacttttgaatcacttataaaaattattgcaaggggcttctgttta
gaagactttactttccttcgggacccatggaactggctcgacttcactgtcattacattt
gcatacgtgacagagtttgtggacctgggcaatgtctcagcactaagaacattcagagtt
ctccgagcactgaaaacaatttcagtcattccaggcctgaagaccattgtgggggccctg
atccagtcagtgaagaagctctctgatgtcatgatcctgactgtgttctgcctgagcgtg
tttgcactgattgggctgcagctgttcatgggcaacctgcggaataaatgtgtacaatgg
cctcccaccaatgcctctctggaggaacacagtatagaaaggaatgtaactatgaattac
aatggcacgcttgtcaatgaaactcgctttgagtttgactggaaatcatacattcaagat
acaagatatcattactttctggagggtgttttggatgccctactgtgtggaaatagctct
gacgcaggtcaatgtccagaaggatatgtgtgtgtgaaagctggtagaaatcctaattat
ggttatacaagctttgataccttcagttgggcctttttgtctttgtttcgactgatgact
caggacttctgggaaaatctgtatcaactgacactacgtgctgctgggaaaacatacatg
atcttttttgtgctggtcattttcctgggctcgttctacctgataaacttgatcctggct
gtggtggccatggcctatgaggaacagaaccaggccaccttggaagaggcagaacagaaa
gaggctgaatttcagcagatgctcgaacagcttaaaaagcaacaggaagcagctcagcag
gcagcagctgtaacagcctcagagcattccagagaacccagtgccactggggggctctcc
gacagctcatctgaagtgtccaagttgagttccaagagtgctaaggaaagaagaaaccgg
agaaagaaaagaaaacagaaagagcagtctggtggggaagagaaagatgaggatgaattc
cataaatctgaatctgaagacagcatcaggaggaaagggtttcgcttctccatagaaggg
aatcggttgacgtatgaaaagaggtactcctccccacaccagtctctgttgagcatccgt
ggctccctattttctccaaggcgaaatagcagaacaagccttttcagcttcagagggcga
gcaaaggatgtgggatcggagaatgactttgccgatgatgagcacagcacctttgaggat
aacgagagccggagagactcgttgttcgtgccccggcgacatggagagcggcgcaacagt
aacctgagtcagaccagtaggtcttcccggatgctggcagtgtttccagcgaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcagttcct
acatcgcctgttggacagcttctgccagagggaacaaccaccgaaactgagatgaggaag
agaaggtcaagttctttccatgtttccatggactttctagaagatccttcccaaaggcaa
agagcaatgagtatagccagcattttaacaaatacagtagaagaacttgaagaatccaga
cagaaatgcccaccctgttggtataaattttctaacatattcttaatctgggactgttca
ccatattggttaaaagtgaaacatattgtcaacctggttgtgatggacccatttgttgac
ctggccatcaccatctgtattgtcttaaatactcttttcatggccatggagcactatcca
atgacagaacatttcaataatgtgcttgcagtaggaaacttggttttcactgggatcttt
acagcagaaatgtttctgaaaattattgccatggatccttactattatttccaagaaggc
tggaatatctttgatggttttatcgtgacgcttagcctggtagaacttggccttgccaat
gtggaaggactatcagttctccgttcattccgactgctccgagttttcaagttggcaaaa
tcttggccaacattaaatatgctaataaagatcatcggcaattctgtgggggctctgggt
aacctcaccttggtgttggccatcattgtcttcatttttgctgtggtcggcatgcagctc
tttggtaaaagctacaaagattgtgtctgcaagatctctaccagctgtgagctcccacgc
tggcacatgaatgacttcttccactccttcctgatagtgttccgtgtgctgtgtggagag
tggatagaaaccatgtgggactgtatggaagttgctggtcaagccatgtgccttactgtc
ttcatgatggtcatggtcattggaaacctggtggtcctgaacctctttctggccttgctt
ctgagctcatttagtgcagacaatcttgcagccacggatgatgacaatgaaatgaacaat
ctccaaatagctgtggacaggatgcacaagggaatagcttacgtgaagagaaaaatatat
gaatttattcaacaatcctttgttagaaaacaaaagattttagatgaaattaaaccactt
gatgatctaaacaataaaaaagacagttgtatgtccaatcatacaacagaaattggaaaa
gatcttgactatcttagagacgtgaatggaacaacaagtggaataggaaccggcagcagt
gttgaaaaatacattattgatgaaagcgattacatgtcattcataaacaatcccagtctt
actgtgactgtaccaattgctgtaggagagtcagactttgaaaatttaaacacagaggac
ttcagtagtgaatcagatctggaggaaagcaaagagaaacttaatgaaagcagtagctcc
tctgaaggcagcactgtggacattggtgcacctgcagaagaacagcctgtagtggaacct
gaggaaacccttgaacccgaagcctgtttcactgaaggctgtgtacaaagattcaaatgt
tgtcaaatcagtgtggaggaagggaggggaaaacaatggtggaatctgagaagaacgtgt
ttccgaatagttgaacataactggtttgagaccttcattgtcttcatgattctccttagt
agtggtgcactggcatttgaagacatatatattgatcagcgaaagacaattaagacaatg
ttggaatatgctgacaaggttttcacttacattttcattctggaaatgcttctgaaatgg
gtggcatatggctatcaaacatatttcaccaatgcctggtgttggctggacttcttaatt
gtggatgtttcactggtcagtttaacagcaaatgccttgggttactcagaacttggtgcc
atcaaatctctcaggacactaagagctctgaggcctctaagagccttatcacgatttgaa
gggatgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaatgtgctt
ctggtttgtcttatattctggctaattttcagcatcatgggcgtaaatttgtttgctggc
aaattctaccactgtattaacaccacaactggtgacatgtttgacatcagcgaagtgaat
aatcattctgattgcctaaaactcatagaaagaaatgagactgcccgatggaaaaatgtg
aaagtaaactttgataatgtaggatttgggtatctctctttgcttcaagttgccacattt
aagggatggatggatataatgtatgcagcggttgattccagaaatgtggaactccagcct
aagtatgaggaaagtctatacatgtatctttactttgttattttcatcatctttgggtcc
ttcttcaccttgaacctgtttattggtgtcatcatagataatttcaaccagcaaaaaaag
aagtttggaggtcaagacatctttatgacagaagaacagaagaaatactacaatgcaatg
aaaaaattaggatcgaaaaagccacaaaagcctatacctcgaccaggaaacaaatttcaa
ggaatggtctttgactttgtaaccagacaagtttttgacataagcatcatgattcttatc
tgtctcaacatggtcacgatgatggtagaaacagatgaccagagtgaatatgtgactacc
attttgtcacgcatcaacctggtgttcattgtgctgttcactggagaatgtgtgctgaag
ctcatatccctccgccattattatttcaccataggctggaatatttttgattttgttgtt
gtcattctctccattgtaggcatgtttctggctgaactgatagaaaaatactttgtgtct
cctaccctgttccgagtgatccggctcgccaggattggccgaatcttgcgactgatcaaa
ggggccaaggggatccgcacgctgctcttcgctctgatgatgtcccttccggccttgttt
aacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatgtccaac
tttgcctatgttaagagggaagttggaattgatgacatgttcaactttgagacctttggc
aacagcatgatctgcctgttccagattaccacctctgctggctgggacggactgctagca
cctattctcaacagtaaaccacccgattgtgaccctaataaagttaaccctggaagctca
gttaagggagactgcgggaacccctctgtcgggattttcttttttgtcagttacatcatc
atctcatttctggtcgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgtt
gctactgaggaaagtgcagagcccctgagcgaggatgactttgagatgttctatgaggtc
tgggagaagtttgatcccgatgccacccagttcatggaatttgaaaaactctctcagttt
gcagctgctctggaaccccccctcaatttgccacaaccaaacaaactccagctcattgcc
atggatttgcccatggtcagtggggaccgaatccactgtcttgacatcttatttgctttt
acaaagcgggttctgggagagagtggagagatggatgctctccgaatacaaatggaagag
agattcatggcttccaatccatcaaaggtctcttatcagccaataacaacgactttaaaa
cggaaacaagaggaggtgtctgccgttattattcagcgtgcttacaggcgccacctttta
aagcgaactgtaaaacaagcttcatttacgtataataaaaataaaatcaaaggtggggct
aatcttcttgtaaaagaagacatgatcattgacagaataaacgaaaactccattacagaa
aaaactgacctgaccatgtccacagcagcttgtccaccttcctatgatcgcgtaacaaag
ccaatcgtggaaaaacatgagcaagaaggcaaagatgaaaaagccaaagggaaataa
DBGET
integrated database retrieval system
