Ursus americanus (American black bear): 123781247
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Entry
123781247 CDS
T07931
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar02010
ABC transporters
uar04148
Efferocytosis
uar04975
Fat digestion and absorption
uar04979
Cholesterol metabolism
uar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123781247 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123781247 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
123781247 (ABCA1)
04979 Cholesterol metabolism
123781247 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123781247 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
uar02000
]
123781247 (ABCA1)
Transporters [BR:
uar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
123781247 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
123781247
NCBI-ProteinID:
XP_045636599
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SMKDIHQVLRTLQQIESSGSSLKLQDFLVDNETFSEFLTYNLSLPRLTVDKMLGASVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGEQEVSKLCSLPREKLDSAEQVLHSNMDILKPIL
RELNSKSPFLSKELAKATKTLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSSSSSQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDAGSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDVQGMWEELS
PKIWTFMESNPEMDLVRTMLDSRSNDHFWKQQLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWAGVVFTG
ITPGSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFVSSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFGVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFSLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFSLTTSVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEETDEKSHPGSSQKGVSEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVPELPPAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLRPFTEDDVIDPNDSDVDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIILPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDLGTQELLNALTRHPGFGTRCMEGNPIPDMPCSVGEEEWTT
APVPQTITDLFQKGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQV
KKHLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggcctcagctgaggttgttgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctatttattttcctgatcctgatc
tccgttcggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcctggtgaggcccctggggttgttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcggcggcttctcttatatagccagaaagacacc
agcatgaaagacatacaccaagttctgaggacattacagcagatagagagttccggttca
agcttgaagcttcaggatttcctagtggacaatgaaaccttctctgaattcctgacttac
aacctttctctgccaaggcttactgtggacaaaatgctgggggccagtgtcagtctccac
aaggtatttttgcaagggtaccagttacatttgaccaatctgtgcagtggatcaaaatta
gaagaggtgattcaacttggtgaacaagaagtttccaagctttgcagcttgccaagggag
aaactggattcagcagagcaagtgcttcattccaacatggacatcctgaaaccgatcctg
agggaactaaactctaagtctcccttcctgagcaaggaactggctaaagccacaaaaact
ttgctggatagtctcgggactttggcgcaagagctgttcagcatgaacagctggagtgac
atgcggcaggaggtcatgttcctgaccaatgtgaacagctccagctcgtccagccagata
taccaagccgtgtcgcgcatcgtctgtggccatcccgagggtgggggcctgaagatcaag
tccctcaactggtacgaggacaacaactacaaagccctctttggcggcaatggcacagat
gaagatgctggcagcttttatgacaattctacaactccttattgcaatgatttgatgaag
aatttggagtccagtcctctttcccgcatcatatggaaagctctcaagcctttgcttgtt
gggaagatcctgtatactcctgacactccagccaccaggcaggtgatggctgaggtgaat
aagacctttcaggaactggctgtgtttcatgatgtgcaaggtatgtgggaagagctcagc
cccaagatctggaccttcatggagagtaacccggaaatggaccttgttcggacaatgttg
gacagcagaagcaatgaccacttttggaaacagcaattggatggcttagactggactgct
aaagatatcctggcatttctggccaagcaccctgaggatgtccagtctgctaatggctct
gtgtacacctggagagaggccttcaatgagactgaccaggcaatccagaccatctctcgc
ttcatggagtgtgtcaacttgaacaaactcgaaccggtagcaacagaagtccggctcatc
aacaagtccatggagttgctggacgagcggaagttctgggctggtgtcgtgttcactgga
atcactcccggcagtgttgagctaccccgtcatgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataagatcaaggatgggtactgggacccgggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggctttgcctacttgcaagacgtggtg
gagcaggcgatcatcagggtgctgacgggcacggagaagaaaactggtgtctatgtgcag
cagatgccttacccctgttacgtcgacgacatcttcctgcgggtgatgagccggtcgatg
cccctgttcatgacgctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggcatc
ctctggttcagctggttcgtcagtagcctcattcctctgctcgtgagcgccggcctgctg
gtggtcatcctgaaattaggaaacctgctgccgtacagcgaccccagcgtggtgtttgtc
tttctgtccgtgttcggcgtggtgaccatcctgcagtgcttcctgatcagcaccctcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcattctgtacctgccc
tatgtgctgtgcgtggcgtggcaagactacgtgggcttctctctcaagatcttcgtgagc
ctgctgtctcctgtggctttcgggtttggctgtgagtactttgcccttttcgaggagcag
ggcattggagtgcagtgggacaacctgtttgagagccccatggaggaggatggcttcagc
ctcaccacttcagtctccatgatgttgttcgacacctttctctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatccccaggccctggtattttccttgc
accaaatcctactggtttggtgaggaaactgatgagaagagccaccctggttccagccag
aagggagtatcagaaatctgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgttgatggcctggcc
ttgaatttctatgagggccagatcacctccttcttgggccacaatggagctggaaagacc
accaccatgtcaatcctgactgggttgttccctcccacctcaggcactgcctacatcctg
gggaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgcccccag
cataacgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgtctg
aaggggctctcggagaagcacgtgaaagcagagatggagcagatggccttggatgtgggt
ttgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggacgagcctact
gccggtgtggacccttactcccgcaggggaatatgggagctcctgctgaaatatcgacaa
ggccgcaccattattctgtccacgcaccacatggatgaagcggacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctgaagaac
cagctgggaacaggctactacctgaccctggtcaagaaggatgtggaatcctccctcagt
tcctgtagaaatagcagtagcactgtgtcatacctgaaaaaggtggtgcctgagcttccc
ccagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctctgccatctccaacctcatcaggaagcatgtggctgaggcccggctagtggaa
gacattgggcatgaactgacatacgtgctgccctacgaagctgccaaagagggggccttt
gtggaactcttccatgagattgatgaccggctctcagacctgggcatctctagttacggc
atctcagagacgaccctggaagaaatatttctcaaagtggctgaagagagtggggtggat
gctgagacctcagatggcaccttgccagcaagacgaaacagacgggccttcggggacaag
cagagctgtcttcgcccattcactgaagatgatgtcattgatcctaatgattctgatgta
gacccagaatccagagaaacagacctgctcagcgggatggacggcaaaggctcctaccag
gtgaagggctggaagctcacacagcagcagtttgtggcccttctgtggaagaggctgctg
attgccagacggagtcggaagggattctttgctcagatcatcctgccagctgtgtttgtt
tgcattgccctggtgttcagcttgatcgtgcccccctttggcaagtaccccagcctggaa
cttcagccctggatgtacaacgaacagtacacgtttgtcagtaatgatgctcctgaggac
ttgggcacccaggaactcttgaatgccctcaccagacaccctggcttcgggacccgatgt
atggaaggaaatccaatcccagacatgccctgctcagtgggggaggaggagtggaccacc
gccccagttccccagaccatcacggacctcttccaaaaaggaaactggacaatggagaac
ccctcacccacctgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtccc
ctaggggcaggggggctgcctcctccacaaagaaaacagaacactgcagacatccttcag
aacctgaccggaagaaacatttcagattatctggtgaagacctatgtgcagatcatagcc
aaaagtttaaagaacaagatctgggtgaatgagtttaggtatggagggttttccctgggt
gccagtaattctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtg
aagaagcacttgaagctggccaaggacagttctgcagatcgatttctcagcagcttggga
aggttcatgacaggactggacacaaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcatgccattagctctttcttgaatgtcatcaacaacgccattctccgggccaacctg
cagaagggagagaaccccagccagtatgggattactgccttcaatcaccccctgaatctc
accaagcagcagctctcggaagtggctctgatgaccacatcagtggatgtcctcgtgtcc
atctgtgtcatcttcgcgatgtccttcgtcccggccagctttgttgtgttcctgatccaa
gagcgggtcagcaaagcaaagcacctgcagttcatcagtggagtgaagcctgtcatctac
tggctctccaatttcgtgtgggatatgtgcaactacgtggtccctgccacgctggtcatt
atcatcttcatctgcttccagcagaagtcctacgtgtcctctaccaacctgcctgtgcta
gcccttctacttctgctgtacgggtggtcgatcacaccgctcatgtacccagcctctttc
gtgttcaagatccccagcacagcctacgtggtcctcaccagtgtgaacctcttcatcggg
atcaacggcagtgtggccacttttgtgctggagctctttaccaacaacaagctgaataac
atcaatgatatcctgaaatctgtattcttgatcttcccacatttttgcctgggacggggg
ctcattgacatggtgaaaaaccaagcaatggctgatgccttggaaaggtttggggagaac
cgtttcgtttcgccactgtcttgggacttagtgggacgaaacctcttcgccatggccgtg
gaaggggtggtgttcttccttatcactgttctcatccagtacagattcttcatcaggccc
agacctgtaaatgcaaagcttcctcctctgaatgatgaggatgaagatgtgaagcgggaa
agacagagaattcttgatggcggaggacagaatgacatcttggaaatcaaggagctgacg
aagatatatagaagaaagaggaagcctgctgttgacaggatttgcgtgggcattcctcct
ggcgagtgctttgggcttctgggagttaatggggctgggaaatcatcaactttcaagatg
ttaactggagataccactgttaccagaggagatgctttccttaacaaaaatagtatcttg
tcagacatccacgaagtccatcagaacatgggctattgccctcagttcgatgccatcaca
gagctgctgaccggaagagagcacgtggagttctttgccctcttgagaggagtcccagag
aaagaagttggcaaggttggtgaatgggcaattcggaaactgggcctcgtaaagtatgga
gaaaaatatgctggtaactatagcggaggcaacaagcgcaagctctcaacggccatggct
ctgattggcgggccccctgtagtgtttctggatgaacctaccacaggcatggaccccaaa
gcccggcgattcttgtggaattgtgccctaagtattgtcaaggaaggcagatcagtagtg
cttacatctcacagtatggaagaatgtgaagctctttgcactaggatggcaattatggtc
aatgggaggttcaggtgtcttggcagtgtccaacatctgaaaaatagatttggggatggt
tatacaatcgtggtacgaatagcagggtccaaccctgacctgaagcctgtgcaggagttc
tttggacttgcctttccaggcagtgtcctcaaggagaagcaccggaacatgctacagtac
cagcttccatcctcactgtcctctctggccaggatattcagcatcctttcccagagcaag
aagagactccacatagaagactactctgtttctcagacaacacttgaccaagtatttgta
aactttgccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaac
cagacagtagtcgatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaa
agttatgtatga
DBGET
integrated database retrieval system
