Ursus americanus (American black bear): 123781859
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Entry
123781859 CDS
T07931
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03013
Nucleocytoplasmic transport
uar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123781859 (CASC3)
03015 mRNA surveillance pathway
123781859 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123781859 (CASC3)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123781859 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
123781859
NCBI-ProteinID:
XP_045637570
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVDAGGQHGGRSGETVKHENSYRSRRLEQTPVR
DPSPEADAPVLGSPEKEEAASEVPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKI
AEDVPPPPEGLNPAPQVPETTPPPPAKTGSWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDNPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPAYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgcc
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcat
ttgcggcgggtggagagcgggggggctaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaggaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagtacagaacctgtggagaac
aaagtgggtaaaaagggtcctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttctttgagcatgatcttcgagggcaaacgcaggaagag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaaattccgggaagacgaacaagctccaaagtcccgacaggagctcattgccctttat
ggctatgacatccgctcagctcacaatcctgacgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattgttgagcggccaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaaggacatttatcaacaggaat
gctgcagggactggccgaatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggacgctggtgggcagcacggtggccggtctggt
gagactgttaaacatgaaaacagttaccgatcacggcgcctcgagcagactcctgtgagg
gacccatctccagaagctgatgctccagtgctcggcagtcccgagaaggaagaggcggcc
tcagaggtaccagccgctgctcccgacactgcaccaccggcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaagatt
gcagaggacgtgccccctccacctgaagggttgaacccggcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaagctgggaggctccagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaatataaccgaacagaactggagtccagggcag
ccttcattcctgcagccacgtgagcttcggggtatgcccaaccacatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcaaagacccgtgccagagccccctgcccctcctgtgcacatc
agtatcatggaaggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacaaccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccgggtctctat
cccccaccagtgtccatgtctccgggacagccgccaccgcagcagctgcttgctcctgct
tacttttctgccccaggcgtcatgaactttggtaaccccagttacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctgtatcctaatacacaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactcctcagccagtcaccatcaaacccccaccacctgaggttgtaagcagg
ggttccagttaa
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