Ursus americanus (American black bear): 123782467
Help
Entry
123782467 CDS
T07931
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03082
ATP-dependent chromatin remodeling
uar04714
Thermogenesis
uar05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123782467 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123782467 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123782467 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
uar03000
]
123782467 (ARID1A)
03021 Transcription machinery [BR:
uar03021
]
123782467 (ARID1A)
03036 Chromosome and associated proteins [BR:
uar03036
]
123782467 (ARID1A)
Transcription factors [BR:
uar03000
]
Eukaryotic type
Helix-turn-helix
ARID
123782467 (ARID1A)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123782467 (ARID1A)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123782467 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
123782467
NCBI-ProteinID:
XP_045638644
LinkDB
All DBs
Position
Unknown
AA seq
2285 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQREEAGGEAAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGAGGGPGAEPDLKNSNGNAGPRPALNNNLTEP
PGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG
LAALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTP
GSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLL
TSPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRSH
HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPSSGPQQGHGYP
GQPYGSQTPQRYPMAMQGRAQSAMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPHP
QQQQPPYSQQPPSQNPHAQPSYQQQPQSQPPQLQASQPPYSQQPSQPPHQQSPTPYPSQQ
STTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRFP
PPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA
VPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSG
GQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGAG
GQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETA
VAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANNS
AGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP
ERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELAT
NLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGS
GSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDPT
FQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGGMRKAPGSDPFMSSGQGPNGGMGD
PYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSGM
YSPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP
PAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATA
TAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQGTMWQ
GRNDMTYNYTNRQSTASAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSA
PVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPP
VPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDP
GQRTLLDPGRFSKASSPAPVEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDKAASES
SEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFE
SKTELLPTRPHVPCPPVTRKHVTAAEGTPGTTEQEGPPPDGPPEKRITATMDDMLSTRSS
TLTEEGAKSAEATKESSKFPFSISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKR
CVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQG
VSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQ
DPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKN
PVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQN
PPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF
LIGQS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcgggaggaggcggggggcgaggcggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cccgccgtggggccgccgcagccgctgggaaaggagctgcaggacggggccgagagcaat
gggggtggcggcggcggtggagccggcgccggcggcgggcccggcgcggagccggacctg
aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccg
cccggcggcggcggcggcggcagcagcgatggggtgggggcgcctcctcactcagccgcg
gccgccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgcc
gtcgccgccgcggcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc
ctggcagcgctgcagagcggcggcggcggtgggggcctggagccctacgcggggccccag
cagaactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgc
agcgcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccg
ggctccggcgcggcggcggccgccggctccaagccgcctccctcctccagcgcctccgcc
tcctcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccc
tcagcggccggcgggggaaccccccagcccaccgccacccccaccctcaaccaactgctc
acgtcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcggg
ccccaagacgggggcgccggcaagggcccggcggacatggcctcgcaatgctggggggct
gcggcggcggcggcggcggcggcggcagccgcctcgggaggggcccaacaaaggagccac
cacgcgcccatgagccccgggagcagcggcggcggggggcagccgctcgcccggaccccg
cagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggact
aacccatactcgcaacaacagggaccttcatcaggaccgcagcaaggacatgggtaccca
gggcagccatatgggtcccagaccccacagcggtacccgatggccatgcagggccgggcg
cagagtgccatgggcggcctctcttatgcacagcagattcctccttatggacaacaaggc
cccagtgggtatggtcaacagggccagactccatattacaaccagcaaagtcctcacccc
cagcagcagcagccgccctactcccagcagccaccatcccagaaccctcacgcccagcct
tcctatcagcagcagccgcagtctcagccaccacagctccaggcttctcagcctccctat
tcccagcagccatcccagcctccacatcagcagtccccgactccatacccctcccagcag
tccaccacccaacagcacccccagagccagcccccgtactcacagccgcaggcacagtct
ccctaccagcagcagcaacctcagcagccagcctcctcgacgctctcccagcaggctgcg
taccctcagccccagtctcagcagtcacagcaaactgcctattcccagcagcgcttccct
ccaccacaggagttatctcaagattcatttgggtctcaggcatcctcagccccctcaatg
acctccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccctcaagc
ttgcctgatctgtctggttcaatagacgatctccccatggggacagaaggagctctgagc
cctggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcag
tctcctttttctcctcatacctcccctcacctgcctggcatccgaggcccctccccgtcc
cctgttggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgca
gtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcat
ccttccatgaaccaatcgagcattgcccaagatcgaggttacatgcagaggaacccccag
atgccccagtacagttccccccagcccggctcggccttatctccgcgtcagccttcgggt
ggacagatgcacacaggcatgggctcctaccagcagaactccatggggagctacggtccc
caggggagtcagtacggcccgcagggaggctaccccaggcaaccaaactataatgccttg
cccaatgctaactaccccagtgcaggcatggccggaagcatgaaccctatgggtgctgga
ggtcagatgcatgggcagcctggcatcccaccttatggcacactccctccagggagaatg
agtcatgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcag
gttgggtcagggatgtgtcccccaccagggggcatgaaccggaaaactcaagaaactgct
gtcgccatgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatg
aatcaggggggcatgatgggaactggacctccctacggacaagggattaatagtatggct
ggcatgatcaaccctcagggacccccgtatcccatgggtgggaccatggccaacaattca
gcagggatggcagccagcccagagatgatgggccttggggatgtcaagttaactccagcc
accaaaatgaacaacaaggcagatgggacacccaagacagaatccaaatccaagaaatcc
agttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcct
gagaggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggcatg
acaaatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtg
aaggagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcgacc
aacctcaatgtgggcacctcaagcagtgctgccagctccttgaaaaagcagtacatccag
tgtctctatgcctttgagtgcaagattgaacggggagaagatcctcccccagacatcttt
gcagctgctgattccaagaagtcccagcccaagatccagcctccctctcctgcgggatct
gggtctatgcaggggccacagacacctcagtcaaccagcagttccatggcagaaggagga
gacctgaaaccaccaactccagcatccacaccacacagtcagatcccccccttgccaggc
atgagcaggagcaattcggttgggatccaggatgcctttcctgatggaagtgaccccaca
ttccagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacctct
gacatgatggggcgcatgtcctacgagccaaataaggatccttatggcggcatgaggaaa
gctccagggagcgatcccttcatgtcctcagggcagggccccaatggcggaatgggagac
ccctacagccgagctgccggccctgggctgggaaatgtggcgatgggaccgcgacagcac
tatccctatggaggtccttatgacagagtgaggacggagcctggaataggacctgaggga
aacatgggcactggagccccacagccgaatctcatgccttccaacccagactcggggatg
tattctcccagccgctaccccccgcagcagcagcagcagcagcaacgacatgattcctat
ggcaatcagttctccactcaaggcaccccttccggcagccccttccccagccagcagacc
acaatgtatcagcagcagcagcagaattacaaacggccaatggatggcacatacggccct
ccagccaagcggcacgaaggggagatgtacagtgtgccgtacagcacggggcaggggcag
ccccaacagcagcagttgcccccagcccagccccagcctgccagccagcagcaagctgcc
cagccttcccctcagcaagatgtgtacaaccagtatggcaacgcctatcctgccactgcc
actgctgctactgagcgccgaccagcgggcggcccccagaaccagtttccattccagttt
ggccgagaccgtgtctctgcaccccccggctccaatgcccagcagaacatgccaccgcag
atgatgggcggccccatacaagcatcagctgaggttgctcagcaaggcaccatgtggcag
gggcgtaatgacatgacctacaattacaccaacaggcagagcactgcctctgccccccag
ggccccgcctatcatggcgtgaaccgaacagatgaaatgctgcatacggatcagagggcc
aaccatgaaggcccgtggccttcccatggcacacgtcagcccccatatggtccctctgcc
cccgtgccccccatgacaaggccccctccatccaactaccagcccccgccaagcatgcag
aatcacattcctcaggtatccagccccgctcccctgccccggccaatggagaaccgcacc
tctcctagcaagtctccattcctacactctgggatgaagatgcaaaaggcaggtccccca
gtacctgcctcgcacatagcacctgcccccgtgcagccacccatgattcggcgggacatc
accttcccacctggctctgtcgaagcaacacagcctgtgttgaagcagaggaggcggctc
acgatgaaagacatcggaaccccggaggcatggcgggtaatgatgtccctcaagtctggg
ctgctggcagagagcacatgggcattagacaccattaacatcctgctgtatgatgacaac
agcatcatgaccttcaacctcagtcagctcccaggtttgctagagctccttgtggaatat
ttccgacgttgcctgatcgagatctttggcattttaaaggagtatgaggtgggtgaccca
ggacagagaacactactggaccctgggagattcagcaaggcatctagtccagcccccgtg
gagggggaggaggaggaagaccttctaggtcctaaactagaggaggaagaagaggaggaa
gtagtggaaaatgacgaggagatggccttttcgggcaaggacaaggcagcctcagagagt
agtgaggagaaactgattagtaagtttgacaagcttccagtaaagatcgtgcagaagaat
gacccgtttgtggtggactgctcagataagcttgggcgcgtgcaggagtttgacagtggc
ctgctgcactggcggattggtgggggggacaccactgagcatatccagacccactttgag
agcaagacagagctgctgccgacccggcctcatgtgccctgcccaccagtcacccggaaa
catgtcacagcagcagagggtacaccagggacaacagaacaggagggccccccgcctgac
ggccctccagaaaaacggatcacagccacaatggatgacatgttgtccacccggtccagc
acgttgaccgaggagggagctaagagtgcagaggccaccaaggagagcagcaagtttcca
ttcagcatcagcccggcacagagccaccggaacatcaagatcctagaggacgaaccccac
agtaaagatgagaccccactgtgtacccttctggactggcaggattccctcgccaagcgc
tgcgtctgtgtctccaataccatccgaagcctgtcgtttgtgccaggcaatgactttgag
atgtccaaacacccagggctgctgctgatcctgggcaagctgatcctcctgcaccacaag
cacccagagcggaagcaggccccactgacttacgagaaggaggaggagcaggaccaaggg
gtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaacacc
ttggtcacactcgccaacatctcggggcagttggacctctccccgtaccccgagagcatt
tgcctgcctgtcctggacggactcctacactgggcagtctgcccttccgctgaagcccag
gaccccttctccaccctgggccccaacgccgtcctctccccccagagactggtcttggaa
accctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacgcccccc
ttcagccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccgaaagaac
ccggtatgccgggagatggccgtggtactgctggccaacctggcgcagggcgacagcctg
gcagcccgcgccatcgccgtgcagaagggcagcatcggcaacctcctcggcttcctggag
gacagccttgctgccacccagttccagcagagccaggccagcctgctccacatgcagaac
ccgcccttcgagccaactagcgtggacatgatgcggcgggctgcccgcgcgctgctggcc
ctggccaaggtggacgagaaccactcggagttcacgctgtacgagtcacggctgttggac
atctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactgttt
ttgattggccagtcatga
DBGET
integrated database retrieval system
