Ursus americanus (American black bear): 123782537
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Entry
123782537 CDS
T07931
Symbol
XNDC1N
Name
(RefSeq) putative short transient receptor potential channel 2-like protein isoform X1
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
uar04040
]
123782537 (XNDC1N)
Ion channels [BR:
uar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123782537 (XNDC1N)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
123782537
NCBI-ProteinID:
XP_045638708
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADSKQGKNRSGVRMFKDDDFLAP
ASGESWDRLRLTCSQPFTRQQSFGLAFLRVCSSLDSLDDPVRGSLAPESSRLSQGSDAQE
SGPSPWLANPSIRRTFFPDPQTSTKEISELKNILKQLQPGALGRSARMVLSAARRVPPAS
MAGAKTSPEEPGPSQPATTELRPEEQSSENDASRTKRRKVQARRALSSSNSRSNQRGMAK
AGQRQHHRPQAQSNGVQESAPCPICAVSFSIEVLPRHAATCGEISPPQPASRSSSPSSSQ
SVLYHPMTLTLIPLVSRIQPQPTCTEIVNKKLRFPPPLLAAIQEGRLGLVQQLLESGVEA
SGSGPSGPLRNVEEAEDRSWREALNLAIQLGHEAITDVLLANVKFDFRQIHEALLVAVDT
NQPAAVQRLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQ
LLMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGMASRAHLSLASEDAMLA
AFQLSRELRRLARKEPEFKPEYIALESLSQDYSFELLGMCRNQSEVTAVLNDQGEDNETE
PEAEGLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWK
LFVAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLAMET
QLSTFRGRSQSVWETSLHMVWVTGFLWFECKEVWIEGLRSYLLDWWNFLDMVILSLYLAA
FALRLLLAGLAHVHCRDAPSGAACHYFTTAERSEWHTEDPQFLAEVLFAVTSMLSFTRLA
YILPAHESLGTLQISIGKMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNET
FQFLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIE
DDADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKGLFYLLRKIFRFVCCCCSCRRTKK
PDYPPIPTYANPGAGAGPGEGQHVSYRLRVIKALVRRYIETAQREFEETRRKDLGNRLTE
LTKTVSRLQSEVAGVQRTLAEGGTPRPPEGASILSRYITRVRNSFQTVGPPIPETPELTV
SGIVGTQVRSETGLQDAGGARTPASGEPGPSSPAHVLVHREQESEAAGDLPQEEDLGIKR
GS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtaaagattagccacgtggtatcattttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagacagtcagaggggaccttggctcagctgtcctcaggac
aagagtgggcaactgaaagtagaactccagctggagagggcagtgcccattggctacatt
gatgtgggtaactgtggctgtgctttcctgcaaattgatgtgggccgttcttcctggtcc
ctggacagaccttttgtcaccctgcttcctgcaaccatgctaatgtccctagctgattca
aagcaggggaaaaatcgctcaggcgtccgcatgtttaaagatgatgatttcctggcgcca
gcctcaggtgagtcatgggatcgacttcgcctgacctgctcccaacccttcacacgtcag
cagtcttttggcctggccttcctccgggtgtgttcctccctggactccttagatgacccc
gtgaggggttccttggcccccgagagctctagactgagccagggctctgatgctcaggag
tctggtcctagcccgtggctggctaatccttccattcggaggacgttcttcccagatccc
cagacgagcaccaaggaaatttcagagcttaagaatatcctgaaacagctgcagccaggg
gctttgggccgttcagcccgcatggtgctttcagctgcccggagggtgccccccgcgagc
atggcaggcgcgaaaaccagccccgaggaaccaggtcctagtcagccagccaccacagag
ctcagaccagaggagcagagctcagagaatgatgcgagcaggacgaagagacggaaagta
caagcccgcagggctttatccagctcgaactcgcggtccaaccagagggggatggcaaag
gcagggcagagacaacaccaccgaccccaggcccaaagtaatggggtccaggagagtgca
ccgtgccccatttgtgcagtctccttcagcattgaggttcttccccggcacgctgcgacc
tgtggagagatctccccacctcagccagcctctcgctcctcatcaccatcttcatcgcag
tctgtactgtaccatcccatgaccttaactctcattcctctggtctccaggatccagcca
cagcccacctgcacagagatcgtgaacaagaagctgaggttcccacctccgctcctggcc
gccatccaggaggggcgcctgggcctggtgcagcagttgctggagtcgggggtcgaggcg
tcaggcagcgggcccagtgggcccctgaggaatgtggaggaggccgaggaccgctcctgg
agggaagctctcaatctggccatccagctgggccacgaggccatcactgatgtgctgttg
gccaatgtcaagtttgacttccggcagatccatgaggccctgctggtggcagtggacaca
aaccagccagctgcggtgcagcgcctgctggcccggctggaacgggagaagggccgcaaa
gtggacactaggtctttctcactggctttcttcgactcgtccatcgatggctcacgcttt
gcccctggtgtcactccactcaccctggcctgccagaaggacttgtatgagatcgcccag
ctgctcatggaccagggccacaccattgcccggccccacccggtctcctgtgcctgcctc
gagtgcagcaatgcccgccgctacgacctgctgaagttctccctgtcccgcatcaacacc
taccgcggcatggccagcagggcccacctctcgctggccagtgaggatgccatgctggct
gccttccagctcagccgggagctcaggcgtcttgcacgcaaggaacctgagtttaagccc
gagtacatcgccctggagtcgctgagccaggactacagctttgaactgctgggcatgtgc
cggaaccaaagcgaggtcactgcggtgctcaatgaccagggcgaggacaacgagactgaa
cctgaggctgagggcctgggccaggcctttgaggagggcatccccaacctggcgaggctg
cgactggccgtcaactacaaccagaagcggtttgtagcgcaccccatctgccagcaagtc
ctgtcctccatctggtgtgggaacctggctggctggcgtggaagcaccaccatctggaag
ctctttgtcgccttcctcatcttcctcaccatgcccttcctctgccttggctattggctg
gcgcccaagtcccggctgggccgcctgctgaagatcccagtgctgaagttcctgctgcac
tccgcctcctatctgtggttcctcatcttcctgctgggcgagtccctggccatggagaca
cagctgagtaccttccgcggccgcagccagagcgtctgggagacttccctacacatggtt
tgggtcacaggcttcctgtggtttgagtgcaaggaggtgtggatcgagggcctgcgcagt
tacctcctggactggtggaacttcctggacatggtcatcctgtccctgtacctggcggcc
ttcgcgctgcgcctccttctggccgggctggcccacgtgcactgccgggatgcccccagt
ggggctgcctgccactacttcaccacggctgagcgaagtgagtggcacaccgaggacccc
cagttcttggcggaagtgctgtttgctgtcaccagcatgctcagcttcacccgcctggcc
tacattctgccggcccatgagtcgctgggcactctgcagatctccattggcaagatgatt
gacgacatgatccggttcatgttcatcctcatgatcatcctgaccgccttcctctgcggc
ctcaacaacatctacgtgccctaccaggagaccgagcggctgggcaatttcaacgagaca
ttccagtttctgttctggaccatgtttggcatggaggagcacagcgtcgtagacatgcct
cagtttctggtgcctgaattcgtgggccgggccctctacggcatctttaccatcgtcatg
gtcattgtgctgctcaacatgctcattgccatgattaccaactccttccagaagattgag
gacgacgcggatgtggagtggaagttcgctcgctccaagctctacctgtcctacttccgg
gagggcctgacgctgcctgtgcccttcaacatcctgccctcccccaagggcctcttctac
cttctcaggaaaattttccgcttcgtctgctgttgctgctcctgccgccgaaccaagaag
ccggactatccgccaatccccacctatgccaatcccggggcaggagcagggcctggggag
ggacagcatgtatcctaccgcctccgagtcatcaaggccctggtacggcgctacatagag
acagcccagcgggagtttgaggagacccgtcggaaagacctgggcaacagactgacggag
ctgaccaagactgtgtctcgtctgcaaagtgaggtggctggtgtgcagcggactctggca
gagggagggacaccccgaccacccgaaggtgccagcatcctcagtcgctacatcacccga
gtgcgtaacagcttccagactgtgggccctcccatccctgaaacccctgagctgacagtg
tcagggattgtggggacccaggtacgttcagaaactgggcttcaggatgctggaggggct
aggactccagcttctggggagcctggcccttcctccccagctcacgtgttagtacacagg
gagcaagaatcagaggcagctggggacctgccccaggaggaagatttggggatcaagagg
ggatcctga
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