Ursus americanus (American black bear): 123782812
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Entry
123782812 CDS
T07931
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123782812 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123782812 (TAF5L)
03036 Chromosome and associated proteins [BR:
uar03036
]
123782812 (TAF5L)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123782812 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
123782812 (TAF5L)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123782812 (TAF5L)
STAGA complex
123782812 (TAF5L)
TFTC complex
123782812 (TAF5L)
SAGA complex
123782812 (TAF5L)
SLIK complex
123782812 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
eIF2A
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
vATP-synt_AC39
ODR4-like
Motif
Other DBs
NCBI-GeneID:
123782812
NCBI-ProteinID:
XP_045639083
UniProt:
A0A452RJ26
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSEGNGLEPTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSAPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactccgacggtcccctgaagcaaggactgaggctgtcacagactgctgag
gagatggcggccaacctcacagtccaatcagaatccggttgtgccaacatagtgtctgca
gccccttgccaggcagagccccagcaatatgaagtacagtttggacgactacggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaatagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaggaagacagctacaactaccttatccgctacctccaa
agtgacaacaacaccgccctgtgcaaagtcctcaccttgcatatccatcttgacgtgcag
cctgccaagagaacagattaccagctctatgccagcggcagctcctctcgaagcgagggc
aacggcttggagcccactgacatgcccgcccctattctgcagaacgaggctgccctggag
gtcttgcaggagagcattaagcgcgtcaaggacggccccccctccctcactaccatctgc
ttctatgccttctataacacagagcagctgctgaacaccgcagaaatctccccagacagc
aagctgctcgctgctgggtttgacaactcctgtataaaactgtggagtttacgatccaag
aagttaaaatcagaaccccatcaagtagacgtgtcccgcatccacttggcttgtgacatt
ctggaggaggaggatgatgaggatgacaatgcgggcacagagatgaagatactacgggga
cactgtggaccagtgtacagcacaaggttcctcgcagacagctcagggttgctctcttgt
tctgaagatatgtccattaggtactgggacctcgggagtttcaccaacactgtgttgtac
caaggacatgcctaccctgtgtgggatctggacattagcccatacagcctgtactttgcc
agcgggtcccatgaccgcaccgcgaggctgtggtcatttgatcggacgtacccgctgaga
atatatgccggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttagccacaggctcgaccgacaagactgtccggctgtggagtgctcaacagggcaactcg
gtgaggctcttcacgggccaccgtggccctgtgctctctcttgccttttctcccaacggt
aagtacttggcctcagctggcgaggaccagcggctgaagctatgggacttggcctctggg
actctttataaagaactgagaggtcacacggacaacatcaccagcctcaccttcagtccg
gacagcagtctgatcgcgtctgcgtccatggacaactcggtgcgcgtctgggacatcagg
aacacttactgcagcgcgcctgccgacggctcgtctggtgaactcgtgggcgtgtacacc
gggcagatgagcaatgtactgagtgtgcagttcatggcctgcaaccttcttctagtgact
ggaatcacacaagagaatcaggaacattaa
DBGET
integrated database retrieval system
