Ursus americanus (American black bear): 123783265
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Entry
123783265 CDS
T07931
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04612
Antigen processing and presentation
uar05145
Toxoplasmosis
uar05152
Tuberculosis
uar05164
Influenza A
uar05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
123783265 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123783265 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
123783265 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
123783265 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
123783265 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
uar01001
]
123783265 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
uar04054
]
123783265 (CIITA)
Enzymes [BR:
uar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
123783265 (CIITA)
Protein kinases [BR:
uar01001
]
Serine/threonine kinases: Other
TAF1 family
123783265 (CIITA)
Pattern recognition receptors [BR:
uar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
123783265 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
CARD
Motif
Other DBs
NCBI-GeneID:
123783265
NCBI-ProteinID:
XP_045639855
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MNHFQTILPRVRMLLSSYRPGQVQALLDHMLEKELLSQEYHGALLREPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQAPVAERDPNSKDHSGSGQCATMELGPLEGGYLELLNSSAD
PLQLYHLYDQTDLAREEIELCSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQY
VFQDSQLDGLGKDIFIEHIGLEEMISESVEVEEAGQKSQKRPFPEELPVDLKHRKLAEPL
AVPVVTGTFLVGSVSDSSALPCLSPPAVFNKEPASSQSWLEEPVLMPVPPSSSLLSCLSL
PAGRIQIVPSLPSLPQGLWQISGAGTGVSGMVIYQGEMPQASQVLPSSGPAMQSLPKSPE
RPGSTSPFAPSAADLPGMPEPALTSRANMTEDQMSPTQCLTAHEVSSKPPKWPETVEQFC
SSLRDKYQAEPAGPEGILVEVELVRARLERNSSKSQERELATPDWAERQLARGGLAEVLL
AAGDRRRPRETQVIAVLGKAGQGKSHWAREVSRAWACGQLPQYDFVFYFPCHCLDRVKDT
YRLQDLLFCLGPQPQPVDEEVFGHILRRPDRVLLILDAFEGLEGQDSLLHSAGGPVSTEP
HSLRGLLAGLFQRKLLRGCTLLLTARPRGRLAQSLSKADVLFEVTGFSAEQAETYVTRYL
ERAGVTEHREQALALLHGQPFLLSHSHSPTVCRAVCRLSEALLEPGGEAELPSTLTGLYV
GLLGPAARDSPPGALAGLARLAWELGRRHRGTLQDSQFPSAEVRAWAVARGLVQPIPGAP
DTELAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLL
FQPHADCLGALAGPAVAALGARKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDAGLW
QHVVQGLPARLSFLGTRLTPPNTYVLCSALAAAGRDFSLDLRSTGIDPSGLGSLVGLGCV
THFRASLSDTVGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRS
PSEDAAELPAVRDLKKLEFALGSVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEG
VEQLSATIPRLKALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNSICDVGAES
LAHVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQL
DSRISLR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgcctcgggtccggatgctgctgtccagctatcgtccg
ggtcaggtgcaggccctcctggaccacatgctggagaaggagctcctgtcccaggagtac
cacggcgccctgctccgcgagcctgatggcgaggccctggccaggaagatctccttgacc
ttgctggaaaaaggagacccggacctggccctcttgaggtgggcatggagcgggtggcag
gccccagtggccgagagggaccccaactccaaggaccacagtggcagtggacagtgtgcc
accatggagttggggcctctagaaggcgggtacctggagcttctcaacagcagtgccgat
cccttgcagctctaccacctctatgaccagacagacctggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgaacagttcagcagactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtgttccaggactcccaactggacggtctgggcaaagacattttcattgagcacatagga
ttggaagaaatgatcagtgagagtgtggaggtggaggaagcagggcagaaaagtcagaaa
agacccttcccagaggaactgcccgtggacttgaagcacaggaagctggctgagcccctc
gctgtgcctgtggtgactggcacgttcctggttgggtcagtgagtgactcctcagccctg
ccctgcctgtcaccacctgccgtgttcaacaaggagccagcatccagccagagctggctg
gaggagcccgtcctgatgcctgtgcccccttccagttccttgctgagctgcctgagtctt
cctgctggacgcatccagatcgtccccagcctcccctccctgccccagggactctggcaa
atctcaggggctgggacaggggtgtctgggatggtcatctatcaaggcgagatgccccag
gccagccaagtgcttccttccagtggccccgccatgcagagcctccccaaatccccagag
cggcccggctccaccagcccctttgcgccgtctgcagctgaccttcctggcatgccagag
ccggctttgacctcccgggcaaatatgaccgaggaccagatgtcccctacgcaatgcctg
acagctcacgaggtctccagcaagcctccgaaatggcctgagacggtggagcagttctgc
agctccctacgggacaagtaccaggctgagcccgcaggcccggaaggcatcctggtggag
gtggagctggtgagggcgcggcttgaaagaaacagcagcaagagccaggagagggagctg
gccaccccggactgggcagagcggcagctggcccgtggggggctggccgaggtgctgcta
gctgcgggggaccgacggcggccgcgggagacacaggtgatcgccgtgctgggcaaagca
ggacagggcaagagccactgggcccgggaagtgagccgagcctgggcctgcggccagctg
ccccagtacgacttcgtcttctacttcccctgccactgtttggaccgtgtgaaggacact
taccgcctgcaggatctgctcttctgcctgggcccccagccacagcccgtggacgaggag
gtcttcggccacatcttgaggaggcctgaccgggttctgctcatcctggacgccttcgag
gggctcgagggccaagacagcctcctgcacagcgcgggtggacctgtgtccactgagccc
cactccctccgggggctgctggccggtctcttccagcgaaagctgctgcgaggctgcacc
ctgctgctcacggcccggccccggggccgcctggcccagagcctgagtaaggccgacgtc
ctgttcgaggtgaccggcttctcagccgagcaggccgagacctatgtgacacgctacttg
gagcgcgctggggtgaccgagcaccgagagcaagccctggcgctcctccacggccagccg
ttcctgctcagccacagccacagccccactgtgtgccgggccgtgtgccggctctccgag
gccctcctggagccgggcggcgaggctgagctgccctccacgctcacgggactctacgtg
ggcctgctgggccctgcggcccgcgacagccccccgggggctctggcaggactggccagg
ctggcgtgggagctgggccgcagacaccggggcaccctgcaggacagccagttcccgtcg
gcggaggtgagagcctgggccgtggccagaggcctggtgcagcccatcccgggggccccg
gacacggagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggctg
gcgctgagcacggaaatcaaggacaaggagctgccacagtacttggcattgaccccgagg
aagaagaggccctatgacaactggctggagggcgtgccgcgcttcctggctgggctgctg
ttccagccccacgccgactgcctcggagccctggccgggccggcagtggccgccttgggg
gccaggaagcagaaggtgctcagcaggtaccttaagcggctgcagccagggacgctacgg
gccggccggctgctggagctgctgcactgtgcccacgaagcttcggacgccgggctctgg
cagcacgtggttcaggggctcccagcccgcctctccttcctgggcacccggctcacaccc
cccaacacttacgtgctgtgcagtgccttggcagcggcgggccgagacttctccctggac
ctccgcagcacgggcattgacccctctgggctggggagccttgtgggactcggctgtgtc
acccatttcagggcttcgctgagcgacacggtagggctctgggagtctctacagcagcgt
ggggagaccaagctactccgggcggtggaggagaagttcaccatcgagcctttcaaggcc
aagtccccgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacgaggagt
ccctcggaagacgcagctgaactccctgccgtccgggacctgaagaagctcgagtttgcg
ctgggctccgtcttgggcccccaggcttttcccaaactggtgaggatcctcgaggccttt
tcctcccttcagcatctggacctggactcgctgagcgagaacaagatcggggacgagggt
gttgagcagctgtcagccaccatccctcggctgaaggccctggagactctcaacttgtcc
cagaacagcattacggatgtgggtgcctgcaagctcgccgaggccttgccctccctggct
gcgtccctcctcaggctgagcctctacaataacagcatctgtgacgtgggagcggagagc
ctggcacacgtgcttccagacatggtgtctctccgggtgttggatgtacagtataacaag
ttcacggccgctggggctcagcagctcgccgccagcctcaggaagtgccctcatgtggag
acactggcgatgtggacgcccactatcccgtttggcgtccatgaacacctgcagcagcta
gactcacggatcagcctgagatga
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integrated database retrieval system
