Ursus americanus (American black bear): 123784184
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Entry
123784184 CDS
T07931
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123784184 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123784184 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
uar03019
]
123784184 (SUPT5H)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123784184 (SUPT5H)
RNA polymerase I system
123784184 (SUPT5H)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123784184 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
123784184
NCBI-ProteinID:
XP_045641447
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MLRSATFKMASWKCVAGDDPRKFRVRRGQRKMSDSEDSNFSEEEDSERSSDGEEAEVEEE
RRSVAGSEKEEEPEEEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDE
DQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSS
VGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTP
LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKE
VANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKR
KKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPT
LSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKIT
IMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMH
ELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVT
VRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKL
VENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGG
GGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQR
LTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLH
DGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQ
VNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPAS
YHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVR
DTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDR
EATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgctcagatctgccactttcaagatggcgtcctggaagtgcgtcgccggagatgatcct
cggaaatttcgcgttaggcgaggccaacggaagatgtcggacagcgaggatagcaacttc
tccgaggaggaggatagcgagcgcagcagtgacggcgaggaggccgaggtagaggaagag
cggcggagtgtagcaggcagtgagaaggaggaagagcccgaggaagaagaggaggaggaa
gaggaggaagaatatgatgaggaagaggaagaggaagatgatgaccggcctcccaagaaa
ccccgccacggcggcttcattctggacgaggctgatgtggacgatgagtatgaggatgag
gaccagtgggaggacggagcagaggacattctagagaaagaagagatcgaagcctccaat
atcgataatgttgtcctggatgaagaccgttctggggctcgccgcctacaaaacctctgg
agggaccagcgagaggaagaactgggcgagtattacatgaagaaatatgccaagtcgtct
gtgggggagacggtgtatggcggatccgatgagctctcggatgacatcacccagcagcag
ctgctcccaggagtcaaggatccaaatctgtggactgtcaaatgtaagattggggaggaa
cgggccacagccatttccttgatgcgcaagttcattgcctaccagttcacagacacgccc
ctgcagattaagtcagtggtggcgccggagcatgtgaagggctacatctacgtggaggcc
tacaagcagacgcacgtgaagcaggccatcgagggtgtgggcaacctgcggcttggctac
tggaaccagcagatggtgcccatcaaggagatgacagatgtgctcaaagtcgtgaaggag
gtggccaacctgaagccaaaatcctgggtccgcctcaagaggggcatctataaggacgac
attgcccaggtggattatgtggagcccagccaaaacaccatctccttgaagatgatcccc
cgcattgactacgaccgcatcaaggcccgcatgagcttgaaagactggtttgccaaaagg
aagaagtttaagcggcctcctcagaggctgttcgacgctgagaaaatcaggtctctgggc
ggcgatgttgcctctgatggtgacttcctcatcttcgaggggaaccgttacagcaggaag
ggctttctgttcaagagctttgccatgtctgctgtgatcacggagggtgtgaagcccaca
ctttctgaactggagaagtttgaggaccagccggagggcattgaccttgaggtggtgact
gagagcacagggaaggagcgagagcacaacttccagcctggggacaatgtggaggtgtgt
gagggcgagctcatcaacctgcagggcaagatcctcagcgtggatggcaacaagatcacc
atcatgcccaagcacgaggacctcaaggacatgctcgagttcccggcccaggaacttcgg
aagtactttaaaatgggggaccacgtgaaggtgattgctggccgatttgagggtgacaca
ggcctcattgtgcgagtggaggagaacttcgtcatcctcttctctgacctcaccatgcat
gagctgaaagtgctcccccgggacctgcagctctgctcagagacggcatcgggcgtggat
gtggggggccagcacgagtggggggagctggtgcagctggacccccagaccgtgggtgtc
atcgtgcgactggagcgggagaccttccaggtgctgaacatgtatgggaaggtggtgacc
gtcaggcaccaggctgtgacccggaagaaggacaaccgctttgccgtggccctggactcg
gaacagaataacatccatgtgaaggacatcgtcaaagtcattgacggcccccactcaggc
cgggagggcgaaattcgccatctcttccgcagcttcgccttcctgcactgcaagaaactg
gtggagaacgggggcatgtttgtgtgcaagacccgccacctggtcctggcagggggctcc
aagccccgagatgtgaccaacttcacggtgggtggctttgcccctatgagcccccggatc
agcagtcccatgcaccccagcgctggaggtcagcgcggtggctttggcagccccggcggc
ggcggcggaggcatgagcaggggccgggggcggagagacaatgagctcatcggccagact
gtgcgcatctcccaagggccctacaaaggctacatcggtgtggtgaaggatgccaccgag
tccacagcccgcgtggagctgcactccacctgccagaccatctctgtggaccgtcagcgg
ctcacgacggtgggctcacggcgcccgggaggcatgacctcaacctacgggcggacgccc
atgtacggctcccagacgcccatgtatggctctggctcccgcacacccatgtatggctct
cagacccctctccaggatggcagccgcaccccacattacggttcacagacacccctgcat
gacggcagccgcactcctgctcagagtggggcctgggaccccaacaatcccaacacgcca
tcccgggcggaagaagaatacgagtatgccttcgacgacgagcccaccccgtccccacag
gcctatgggggcacccccaatccccaaacacctggctatcccgacccctcatccccacag
gtcaaccctcagtataacccacagacgccagggacaccagccatgtacaacacagaccag
ttctccccctatgctgccccctccccgcaaggctcctaccagcccagccccagcccgcag
agctaccaccaggtggcgccaagcccagcaggctaccagaacacccactctccagctagc
taccaccccacaccctcacccatggcctatcaggccagccccagcccgagccctgttggc
tacagtccgatgacgcccggagccccctcccctggtggctacaacccgcacacgccaggc
tcaggcattgagcagaactccagcgactgggtaaccactgacatccaggtgaaggtgcgg
gacacctacctggatacgcaggtggtggggcagacaggagtcatccgcagcgtcacagga
ggcatgtgctccgtgtacctaaaggacagtgagaaggtggtcagcatctccagtgagcac
ctggagcccatcacccccaccaagaacaacaaggtgaaggtgatcctgggtgaggatcgg
gaagccacgggggtcctattgagcatcgatggggaggacggcatcgtccgcatggacctt
gatgagcagctcaagatcctcaacctccgcttcctggggaagcttctggaggcctga
DBGET
integrated database retrieval system
