Ursus americanus (American black bear): 123784800
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Entry
123784800 CDS
T07931
Symbol
COL4A6
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
uar
Ursus americanus (American black bear)
Pathway
uar04151
PI3K-Akt signaling pathway
uar04510
Focal adhesion
uar04512
ECM-receptor interaction
uar04820
Cytoskeleton in muscle cells
uar04926
Relaxin signaling pathway
uar04933
AGE-RAGE signaling pathway in diabetic complications
uar04974
Protein digestion and absorption
uar05146
Amoebiasis
uar05165
Human papillomavirus infection
uar05200
Pathways in cancer
uar05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123784800 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123784800 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123784800 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123784800 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123784800 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
123784800 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123784800 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
123784800 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123784800 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
123784800 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123784800 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uar04147
]
123784800 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
uar00536
]
123784800 (COL4A6)
Exosome [BR:
uar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123784800 (COL4A6)
Glycosaminoglycan binding proteins [BR:
uar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123784800 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123784800
NCBI-ProteinID:
XP_045642234
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKSYGKPCGGQDCRGGCKCFPEKGARGRPGPIGIQGP
TGPQGFAGPSGLAGLKGERGLPGPLGPYGPKGDKGTMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGYQGPDGYPGLLGPPGLPGQKGSKGEPVLAQGTFKGMKGEPGLPGLD
GINGPPGAPGSPGAIGPMGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLPGFPGISGPPGLPGFGTAGEKGEKGIPGLPGPRG
PMGLEGLQGPPGSQGKKGSSGFPGLNGFPGIKGEKGGIGLPGPDVFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLLGPSGVPGLPALPGAPGALGPQGVPGLKGDQGNPGRTTVGTA
GSPGRDGLPGLPGLPGPPGPAFETGTLQNAEPGFPGLRGERGPKGNPGLKGMKGDSGFCA
CDGGVPNTGPPGEPGLPGPPGLIGLPGLKGTRGDPGSGGAQGPSGAPGLFGPPGRTGPKG
EKGEQTLSSGSGVPGEQGDPGPQGLPGETGAPGKDGIPGLPGLPGLPGDGGQGFPGEKGL
PGLPGEKGHSGPTGPPGIGLPGSPGPRGFPGDQGIDGLPGQQGLPGLPGDCCCRESTGKG
DLVTEGGITLPCIIPGSYGPSGLPGTPGFPGPKGARGLPGTPGQPGLRGNKGEPGSPGSV
HLPELPGFPGPRGEKGLPGFPGLPGKDGLPGNLGSPGLPGSKGAPGDIFGAENGAPGEQG
LQGLPGDRGVPGDSGLPGPKGLLGKSGLLGPKGERGSPGTPGHMGQPGSPGPDGLFGVKG
KPGLPGAPGFPGLSGHPGKKGVRGEAGAPSSAGKRGLPGLKGLPGSPGLVGFLGSSGLPG
NTGLPGLPGPKGEKGSVGLAGFPGMPGLPGIPGASGLKGISGSAGRVGPSGQAGGAGEKG
DRGDPGPAGIPSPRPPMLNLQFKGDKGSRGSAGLDGFPGPRGDKGEAGPPGPPGLPGAPG
FPSTIKGLIGRAGLPGSTGQRGLPGLKGSPGITGFPGIPGESGSQGLNGAPGLPGTSGLP
GSKGDQGQTLGISGSPGPKGQPGESGFKGMKGTDGLVGDVGFPGSKGEDGNVGISGDVGL
PGSPGLPGIAGMRGNPGFPGSPGHPGATGPLGSSGLMGTKGFPGFPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGERGSLGSGLGAPGKSGMKGQKGGRGFPGLQGPVGLPGA
PGLSLPSVIVGQPGDPGRPGLDGERGRPGSPGPPGPPGPSSDQGTPGDPGFPGVPGPKGP
RRDQGIPGFSGFPGELGLKGVRGEPGFMGIPGKVGPPGDPGLPGMKGKAGPQGFAGPRGA
PGQTPIAEAVQVPPGPMGLPGIDGIPGLTGDPGVQGPVGFQGSKGLLGIPGKDGLNGLPG
PPGALGDPGLPGLQGPPGFEGAPGKKGPFGRAGAPGQSVRVGYTLVKHSQSEQVPVCPIG
MSQLWVGYSLLFVEGQEKAHNQDLGLAGSCLPRFSTMPFIYCNIDEVCHYAGRNDKSYWL
STTAPIPMMPVGQAQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPWGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPASETLKAGQLHTRVSRCQVCMKSL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggcttctcctggttacgttgtgcctgacggaggaactggcagga
gccggtgagaagaagtcctatggaaagccatgtgggggccaagactgcaggggaggctgt
aaatgctttcctgagaaaggagcgagagggcgaccgggaccaatcggaattcaaggtcca
acgggtcctcaaggatttgccggccctagtggtttagccgggttgaaaggagaaaggggg
ctcccagggcccctgggaccatatggaccaaaaggagataagggtaccatgggagttcct
ggctttctcggcatcaatgggattccgggccaccccggacagccagggcccaggggccca
cctggcctggatggctgtaatggcactcaaggagctgttggatatcagggccctgatggc
tatcctgggcttctcggaccacccgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgcccaaggtactttcaaaggaatgaagggggagcctggactgcctggactggat
ggaatcaatggtccaccaggagcacctgggtccccaggagcgataggacccatgggacca
ccaggattgcagggtcctccaggtccccctggcttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggcctcccaggccctgcagga
cccccaccctctaccggggagctggaatttatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcttccgggtttcccaggaataagtggccctccaggtctcccagga
ttcggaactgctggagaaaagggagaaaagggaatccctggtttgccaggaccgaggggt
cccatgggtttagaaggactccaaggccctccagggagtcagggcaagaaggggtcctca
ggtttccctgggcttaatggattcccaggaattaagggtgaaaagggtggcattggcctg
ccgggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cccggtatgccaggcctcccaggacttaaaggagatgaaggcatccagggcctgcttggc
ccttctggcgtccccggcttgccagctttaccaggtgccccaggtgccctagggccccaa
ggagttccaggtctgaagggggaccaaggaaacccaggccgcaccacagttgggacagct
gggtcccctggcagagatggtttgccaggcctgcccggcctcccggggccccccggtcca
gcatttgagactggaaccctacagaacgcagagccaggcttccctggtctccgaggagaa
cgaggtccaaaaggaaacccaggcctcaaaggaatgaaaggggactcgggcttttgtgct
tgcgacggtggtgtccctaacactggaccacctggggagccaggcctgcctgggccaccc
gggctcataggccttccaggccttaaaggaaccagaggagatccaggctctgggggtgca
cagggcccatcaggggctccaggtttgtttgggcctcccggtcgcacaggccccaaagga
gagaaaggggaacagactctcagttcaggatcaggggtgccgggggagcagggtgatcct
ggcccccaggggctccctggggagaccggagccccaggcaaggatggaatacccggctta
ccaggtctgccaggcctcccgggtgacggtggacagggcttcccaggtgaaaagggttta
cccggacttcctggtgaaaagggccacagtggtccaactggccccccaggaattgggctg
ccgggatctcctggacctcgtgggtttcctggagatcaaggaatcgatggattaccaggg
caacaaggcctccctgggcttcctggtgactgctgctgcagggagagcactggtaaagga
gacttagtcacagagggagggatcaccttgccgtgtataattcctggctcctatggtcca
tcaggcttaccaggaactcccggattcccaggccctaaaggggcccgtggcctccctggg
accccaggccagcccggactgcgtgggaataaaggagagcctggaagtccaggatcagtt
caccttcctgaattgccaggatttcctggacctcgtggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcctgggaacctgggcagtccaggtttacccggt
tccaagggagcccctggtgacatctttggtgcagagaatggtgctccgggggagcaaggc
ctacagggattgccaggggacagaggagttcctggagactctggccttccagggcccaag
ggtttgcttgggaagtcgggcctgctaggccccaaaggtgaacggggcagccctggcaca
ccgggccacatgggacagccagggtccccagggcctgatggtttattcggcgtcaagggc
aaacccgggctcccgggtgcaccaggctttccaggcctttcaggacatcctggaaagaaa
ggtgtaagaggtgaggcaggtgccccttcatcagctggaaagagaggcctgccggggctg
aaaggccttccgggatctccagggctggttggcttcttggggagctcaggcttgccaggg
aacactgggttgccaggcctgccaggtccgaagggtgagaaggggtctgttgggctggca
ggctttccggggatgcctggtctcccaggtattcctggcgcgagtggattaaagggaatt
tctgggtcagccggaagagtgggaccatctggacaggccggtggtgctggtgagaaagga
gacagaggcgaccccgggccagctggaatacctagcccaagacctcccatgctgaacctc
cagttcaaaggggacaaaggatccagaggctcagctggattggacggatttcctgggccc
agaggtgacaaaggagaggctgggccccccgggccaccagggttgcctggagctcctggc
ttccccagtaccatcaagggactcattggcagagctggcctccctggctccactggacaa
cggggcttacctggcctgaaggggtcccctggaatcacaggcttcccaggaataccaggg
gaaagcggttcacagggtctcaatggagcacctggactcccaggaacatctggtctccca
ggttcaaagggagatcaaggtcagacacttggaatttctggtagcccaggacccaaggga
caacctggggagtctggttttaaaggcatgaaaggaacagatgggcttgttggtgatgtg
ggtttcccaggaagcaaaggtgaagatgggaatgttggtatttctggagatgttggcctt
cctggctccccaggactccccgggattgcaggcatgagaggaaatccagggtttccgggt
tctccaggccatccaggggcaactgggcccctgggatcatctggcctaatgggaaccaaa
ggtttccctggattccctggtttacatggactgaatgggcttccaggaaccaaggggacc
catggaactccaggacctagtataaccggcgtgcctgggccagctggcctgcctggtcca
aagggggaaagaggttctctaggaagtggccttggagccccaggcaagtcaggcatgaaa
ggacaaaaaggtggccgaggtttcccaggtctccagggccctgttggtctgcccggtgcc
ccaggcctctccttgccctcagtcatagtgggacagcctggcgaccctgggcgaccaggc
ctagatggagagcgaggccgcccaggctcccccgggcccccagggccccctgggccatcc
tccgatcaagggacccctggagaccctggcttccctggagttcctggccctaagggccca
aggagagaccaaggaattccaggcttctccggcttccctggagagctaggactgaaaggc
gtgagaggtgagcctggcttcatggggattccaggcaaggttgggccacctggagaccca
ggacttcccggaatgaaggggaaggcagggccccaaggctttgccggaccccgaggtgct
cctggacaaacaccaattgcagaagctgtccaggttcctcctggacccatgggtctaccg
ggcatcgatggcatccctggcctcacgggggaccctggggttcaaggccctgtgggcttc
caaggctccaaaggtttactgggcatccctggcaaagatggtctcaacgggctccccggc
ccgcctggggctctcggtgatcctggtctccctggactgcaaggccctccaggatttgaa
ggagctccagggaagaagggtcccttcgggagggctggagcgcccgggcagagcgtgaga
gtggggtacaccttggtgaagcacagccagtcggaacaggtgcccgtgtgccccatcggg
atgagccagctgtgggtgggttacagcttgcttttcgtggaggggcaggagaaagcccac
aaccaggacctgggtttggctggctcctgcctgccccgcttcagcaccatgcccttcatc
tactgcaacatcgacgaagtgtgccactacgctgggcgcaacgataaatcctactggctc
tccaccaccgcccccattcccatgatgcccgtcggccaggcccagatcccccagtacatc
agccgctgttccgtgtgtgaggcgccctcgcaggccattgccgtgcacagccaggacatc
accatcccgcagtgcccctggggctggcgcagcctctggatcgggtactccttcctcatg
cacactgcggcgggcgccgagggcggcggccagtcgctggtctcccccggctcctgcctg
gaggatttccgcgccacgcccttcatcgagtgcagcggggcccggggcacctgccactac
ttcgccaacaagtacagtttctggctgaccacagtggaagagaggcagcagtttggggag
gagccggcatccgaaacgctcaaggccgggcagctccacacccgggtcagccgctgccag
gtgtgtatgaaaagcctgtag
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integrated database retrieval system
