Ursus americanus (American black bear): 123785081
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Entry
123785081 CDS
T07931
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123785081 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uar03019
]
123785081 (PATL1)
Messenger RNA biogenesis [BR:
uar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123785081 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
123785081 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
123785081
NCBI-ProteinID:
XP_045642709
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAIDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAVMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAAPPPPQQHSPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALADERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPPNPHLAAVLQNKFGLSLLLVVLSRGEDLQSSDPATEPTQNNQWTEVMF
MATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctggatgaagatgaagatgcatttcag
ggcttgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gccattgatgatgattggcaggaagcacatgagcgcctggctgaattggaagagaagctg
ccggtggcagttaatgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagctgtcatgagggcagtgcagaccaggccagttctgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactcctt
gctcaggaaatgcctacggtgtctgtattagaatatgccctgcctcagaggcccccacag
ggtccagaagatgatcgagacctttccgagcgcgcattaccacggcggtcaacttcacct
atcattgggagtcctcctgttagagccgtccccataggcaccccgcctaagcagatggct
gtacccagcttcaaccaacagatcctgtgtccgaagcctgtccatgtccggcccccgatg
cccccgcggtatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctaccgcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgccgccatgaatcccaagttg
ctgcaggggcgagtagggcaggtgcttcccccagcacccggcttccgtgccttctttagt
gctgcgccccctgccgctccaccgcctccgcagcagcactcccccggcccagggcctcac
ctgcaaaacctaagatctcaggccccaatgtttagaccagacacaactcacctccaccca
cagcaccgtcggctcttgcatcagagacagcaacagaacagaaatcagcaccggagtctc
aatggggccggagacagaggaagtcaccggagcagtcatcaggaccacctccggaaggac
ccctatgccaacctcatgctgcagcgagagaaggattgggtctcgaaaatccagatgatg
cagctgcagagcactgacccgtacctggacgatttctattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaagttcaaggcgagggcccgaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcctacaagccagtgcagttcgag
ggctctttgggaaagcttaccgtctctagtgtgaataacccccgaaaaatgattgatgct
gttgtgacatcacggagtgaggatgacgagacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctatagtttactcctggatgtggaggattat
gaaaggcggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaag
cacaaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggccg
agcgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggtcgcccgt
attcttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaat
ctccctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtccc
ttctctctgctcctctatcaccttccgtcagtgaccgtcaccagccttctgcaacagctc
atgaacctacctcagagcgcagctgcaccagcgccccccaaccctcacctcgccgctgtg
ctccagaacaagtttggcctgtcactgctccttgtcgtcctgagccgtggggaagaccta
cagagttcagaccctgctacggaaccaacacagaacaaccagtggacggaggtgatgttc
atggcaacccgagaacttctccggatcccccaagcagccctggccaagccaatctctata
cccacaaacctggtgtccctcttttctcgctatgttgaccgacagaaactgaacttgctg
gagacaaagctgcagctagttcaggggatccgatag
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